Literature DB >> 21954841

Fick diffusion coefficients of liquid mixtures directly obtained from equilibrium molecular dynamics.

Xin Liu1, Sondre K Schnell, Jean-Marc Simon, Dick Bedeaux, Signe Kjelstrup, André Bardow, Thijs J H Vlugt.   

Abstract

A methodology for computing Fick diffusivities directly from equilibrium molecular dynamics (MD) simulations is presented and validated for acetone-methanol and acetone-tetrachloromethane liquid mixtures. Fick diffusivities are obtained from Maxwell-Stefan (MS) diffusivities and the so-called thermodynamic factor. MS diffusivities describe the friction between different components, while the thermodynamic factor is the concentration derivative of the activity describing the deviation from ideal mixing behavior. It is important to note that all mutual diffusion experiments measure Fick diffusion coefficients, while molecular simulation provides MS diffusivities. The required thermodynamic factor to convert MS into Fick diffusivities and vice versa, however, is usually difficult to extract from both simulations and experiments leaving a gap between theory and application. Here, we employ our novel method to compute the thermodynamic factor from small-scale density fluctuations in equilibrium MD simulations [Chem. Phys. Lett.2011, 504, 199-201]. Previously, this method was developed and validated for molecules with single interaction sites only. In this work, we applied this method to acetone-methanol and acetone-tetrachloromethane liquid mixtures and show that the method also works well in these more complex systems. This provides the missing step to extract Fick diffusion coefficients directly from equilibrium MD simulations. The computed Fick diffusivities of acetone-methanol and acetone-tetrachloromethane mixtures are in excellent agreement with experimental values. The suggested framework thus provides an efficient route to model diffusion in liquids on the basis of a consistent molecular picture.

Entities:  

Year:  2011        PMID: 21954841     DOI: 10.1021/jp208360s

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  6 in total

1.  MD simulation study of the diffusion and local structure of n-alkanes in liquid and supercritical methanol at infinite dilution.

Authors:  Huajie Feng; Wei Gao; Li Su; Zhenfan Sun; Liuping Chen
Journal:  J Mol Model       Date:  2017-05-30       Impact factor: 1.810

2.  Finite-Size Effects of Binary Mutual Diffusion Coefficients from Molecular Dynamics.

Authors:  Seyed Hossein Jamali; Ludger Wolff; Tim M Becker; André Bardow; Thijs J H Vlugt; Othonas A Moultos
Journal:  J Chem Theory Comput       Date:  2018-04-30       Impact factor: 6.006

3.  Optimizing Nonbonded Interactions of the OPLS Force Field for Aqueous Solutions of Carbohydrates: How to Capture Both Thermodynamics and Dynamics.

Authors:  Seyed Hossein Jamali; Thijs van Westen; Othonas A Moultos; Thijs J H Vlugt
Journal:  J Chem Theory Comput       Date:  2018-11-20       Impact factor: 6.006

4.  Characterizing the Diffusion and Rheological Properties of Aged Asphalt Binder Rejuvenated with Bio-Oil Based on Molecular Dynamic Simulations and Laboratory Experimentations.

Authors:  Xiaorui Zhang; Chao Han; Xinxing Zhou; Frédéric Otto; Fan Zhang
Journal:  Molecules       Date:  2021-11-23       Impact factor: 4.411

5.  Shear Viscosity Computed from the Finite-Size Effects of Self-Diffusivity in Equilibrium Molecular Dynamics.

Authors:  Seyed Hossein Jamali; Remco Hartkamp; Christos Bardas; Jakob Söhl; Thijs J H Vlugt; Othonas A Moultos
Journal:  J Chem Theory Comput       Date:  2018-10-23       Impact factor: 6.006

6.  Generalized Form for Finite-Size Corrections in Mutual Diffusion Coefficients of Multicomponent Mixtures Obtained from Equilibrium Molecular Dynamics Simulation.

Authors:  Seyed Hossein Jamali; André Bardow; Thijs J H Vlugt; Othonas A Moultos
Journal:  J Chem Theory Comput       Date:  2020-05-08       Impact factor: 6.006

  6 in total

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