Literature DB >> 3035542

Helicase properties of the Escherichia coli UvrAB protein complex.

E Y Oh, L Grossman.   

Abstract

The Escherichia coli UvrA protein has an associated ATPase activity with a turnover number affected by the presence of UvrB protein as well as by DNA. Specifically, the structure of DNA significantly influences the turnover rate of the UvrAB ATPase activity. Double-stranded DNA maximally activates the turnover rate 10-fold whereas single-stranded DNA maximally activates the turnover rate 20-fold, suggesting that the mode of interaction of UvrAB protein with different DNAs is distinctive. We have previously shown that the UvrAB protein complex, driven by the binding energy of ATP, can locally unwind supercoiled DNA. The nature of the DNA unwinding activity and single-stranded DNA activation of ATPase activity suggests potential helicase activity. In the presence of a number of helicase substrates, the UvrAB complex, indeed, manifests a strand-displacement activity--unwinding short duplexes and D-loop DNA, thereby generating component DNA structures. The energy for the activity is derived from ATP or dATP hydrolysis. Unlike the E. coli DnaB, the UvrAB helicase is sensitive to UV-induced photoproducts.

Entities:  

Mesh:

Substances:

Year:  1987        PMID: 3035542      PMCID: PMC304930          DOI: 10.1073/pnas.84.11.3638

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  24 in total

1.  Reconstitution of an Escherichia coli repair endonuclease activity from the separated uvrA+ and uvrB+/uvrC+ gene products.

Authors:  E Seeberg
Journal:  Proc Natl Acad Sci U S A       Date:  1978-06       Impact factor: 11.205

2.  Bacteriophage T4 gene 41 protein, required for the synthesis of RNA primers, is also a DNA helicase.

Authors:  M Venkatesan; L L Silver; N G Nossal
Journal:  J Biol Chem       Date:  1982-10-25       Impact factor: 5.157

3.  Purification and properties of the uvrA protein from Escherichia coli.

Authors:  E Seeberg; A L Steinum
Journal:  Proc Natl Acad Sci U S A       Date:  1982-02       Impact factor: 11.205

4.  Kilo-sequencing: creation of an ordered nest of asymmetric deletions across a large target sequence carried on phage M13.

Authors:  W M Barnes; M Bevan; P H Son
Journal:  Methods Enzymol       Date:  1983       Impact factor: 1.600

5.  New M13 vectors for cloning.

Authors:  J Messing
Journal:  Methods Enzymol       Date:  1983       Impact factor: 1.600

6.  Mapping simian virus 40 mutants by marker rescue.

Authors:  C J Lai
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

7.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

8.  Uptake of homologous single-stranded fragments by superhelical DNA. II. Characterization of the reaction.

Authors:  K L Beattie; R C Wiegand; C M Radding
Journal:  J Mol Biol       Date:  1977-11       Impact factor: 5.469

9.  Uptake of homologous single-stranded fragments by superhelical DNA. IV. Branch migration.

Authors:  C M Radding; K L Beattie; W K Holloman; R C Wiegand
Journal:  J Mol Biol       Date:  1977-11       Impact factor: 5.469

10.  The effect of Escherichia coli Uvr protein binding on the topology of supercoiled DNA.

Authors:  E Y Oh; L Grossman
Journal:  Nucleic Acids Res       Date:  1986-11-11       Impact factor: 16.971

View more
  33 in total

1.  Crystal structure of the DNA nucleotide excision repair enzyme UvrB from Thermus thermophilus.

Authors:  M Machius; L Henry; M Palnitkar; J Deisenhofer
Journal:  Proc Natl Acad Sci U S A       Date:  1999-10-12       Impact factor: 11.205

2.  Clue to damage recognition by UvrB: residues in the beta-hairpin structure prevent binding to non-damaged DNA.

Authors:  G F Moolenaar; L Höglund; N Goosen
Journal:  EMBO J       Date:  2001-11-01       Impact factor: 11.598

Review 3.  Modularity and specialization in superfamily 1 and 2 helicases.

Authors:  Martin R Singleton; Dale B Wigley
Journal:  J Bacteriol       Date:  2002-04       Impact factor: 3.490

4.  Role of DnaB helicase in UV-induced illegitimate recombination in Escherichia coli.

Authors:  K Hanada; T Yamashita; Y Shobuike; H Ikeda
Journal:  J Bacteriol       Date:  2001-09       Impact factor: 3.490

5.  Interactions between UvrA and UvrB: the role of UvrB's domain 2 in nucleotide excision repair.

Authors:  James J Truglio; Deborah L Croteau; Milan Skorvaga; Matthew J DellaVecchia; Karsten Theis; Bhaskar S Mandavilli; Bennett Van Houten; Caroline Kisker
Journal:  EMBO J       Date:  2004-06-10       Impact factor: 11.598

6.  Structure and mechanism of the UvrA-UvrB DNA damage sensor.

Authors:  Danaya Pakotiprapha; Martin Samuels; Koning Shen; Johnny H Hu; David Jeruzalmi
Journal:  Nat Struct Mol Biol       Date:  2012-02-05       Impact factor: 15.369

7.  ATPase activity of the UvrA and UvrAB protein complexes of the Escherichia coli UvrABC endonuclease.

Authors:  E Y Oh; L Claassen; S Thiagalingam; S Mazur; L Grossman
Journal:  Nucleic Acids Res       Date:  1989-06-12       Impact factor: 16.971

8.  Potential role of proteolysis in the control of UvrABC incision.

Authors:  P R Caron; L Grossman
Journal:  Nucleic Acids Res       Date:  1988-10-25       Impact factor: 16.971

Review 9.  Formation and repair of interstrand cross-links in DNA.

Authors:  David M Noll; Tracey McGregor Mason; Paul S Miller
Journal:  Chem Rev       Date:  2006-02       Impact factor: 60.622

10.  ATP-dependent partitioning of the DNA template into supercoiled domains by Escherichia coli UvrAB.

Authors:  H S Koo; L Claassen; L Grossman; L F Liu
Journal:  Proc Natl Acad Sci U S A       Date:  1991-02-15       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.