Literature DB >> 2525700

ATPase activity of the UvrA and UvrAB protein complexes of the Escherichia coli UvrABC endonuclease.

E Y Oh1, L Claassen, S Thiagalingam, S Mazur, L Grossman.   

Abstract

We have analyzed the ATPase activity exhibited by the UvrABC DNA repair complex. The UvrA protein is an ATPase whose lack of DNA dependence may be related to the ATP induced monomer-dimer transitions. ATP induced dimerization may be responsible for the enhanced DNA binding activity observed in the presence of ATP. Although the UvrA ATPase is not stimulated by dsDNA, such DNA can modulate the UvrA ATPase activity by decreases in Km and Vm and alterations in the Ki for ADP and ATP-gamma-S. The induction of such changes upon binding to DNA may be necessary for cooperative interactions of UvrA with UvrB that result in a DNA stimulated ATPase for the UvrAB protein complex. The UvrAB ATPase displays unique kinetic profiles that are dependent on the structure of the DNA effector. These kinetic changes correlate with changes in footprinting patterns, the stabilization of protein complexes on DNA damage and with the expression of helicase activity.

Entities:  

Mesh:

Substances:

Year:  1989        PMID: 2525700      PMCID: PMC317925          DOI: 10.1093/nar/17.11.4145

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  26 in total

1.  Macromolecular characterization by sedimentation equilibrium in the preparative ultracentrifuge.

Authors:  R J Pollet; B A Haase; M L Standaert
Journal:  J Biol Chem       Date:  1979-01-10       Impact factor: 5.157

2.  Amplification and purification of UvrA, UvrB, and UvrC proteins of Escherichia coli.

Authors:  D C Thomas; M Levy; A Sancar
Journal:  J Biol Chem       Date:  1985-08-15       Impact factor: 5.157

3.  Sequences of Escherichia coli uvrA gene and protein reveal two potential ATP binding sites.

Authors:  I Husain; B Van Houten; D C Thomas; A Sancar
Journal:  J Biol Chem       Date:  1986-04-15       Impact factor: 5.157

4.  Construction of DNA substrates modified with psoralen at a unique site and study of the action mechanism of ABC excinuclease on these uniformly modified substrates.

Authors:  B Van Houten; H Gamper; J E Hearst; A Sancar
Journal:  J Biol Chem       Date:  1986-10-25       Impact factor: 5.157

5.  Activities and incision patterns of ABC excinuclease on modified DNA containing single-base mismatches and extrahelical bases.

Authors:  D C Thomas; T A Kunkel; N J Casna; J P Ford; A Sancar
Journal:  J Biol Chem       Date:  1986-11-05       Impact factor: 5.157

6.  Protein complexes formed during the incision reaction catalyzed by the Escherichia coli UvrABC endonuclease.

Authors:  A T Yeung; W B Mattes; L Grossman
Journal:  Nucleic Acids Res       Date:  1986-03-25       Impact factor: 16.971

7.  Characterization of the DNA-dependent GTPase activity of T4 gene 41 protein, an essential component of the T4 bacteriophage DNA replication apparatus.

Authors:  C C Liu; B M Alberts
Journal:  J Biol Chem       Date:  1981-03-25       Impact factor: 5.157

8.  Helicase properties of the Escherichia coli UvrAB protein complex.

Authors:  E Y Oh; L Grossman
Journal:  Proc Natl Acad Sci U S A       Date:  1987-06       Impact factor: 11.205

9.  Involvement of a cryptic ATPase activity of UvrB and its proteolysis product, UvrB* in DNA repair.

Authors:  P R Caron; L Grossman
Journal:  Nucleic Acids Res       Date:  1988-10-25       Impact factor: 16.971

10.  Strand-break formation in DNA modified by benzo[alpha]pyrene diolepoxide. Quantitative cleavage by Escherichia coli uvrABC endonuclease.

Authors:  E Seeberg; A L Steinum; M Nordenskjöld; S Söderhäll; B Jernström
Journal:  Mutat Res       Date:  1983-06       Impact factor: 2.433

View more
  20 in total

1.  Crystal structure of the DNA nucleotide excision repair enzyme UvrB from Thermus thermophilus.

Authors:  M Machius; L Henry; M Palnitkar; J Deisenhofer
Journal:  Proc Natl Acad Sci U S A       Date:  1999-10-12       Impact factor: 11.205

2.  Clue to damage recognition by UvrB: residues in the beta-hairpin structure prevent binding to non-damaged DNA.

Authors:  G F Moolenaar; L Höglund; N Goosen
Journal:  EMBO J       Date:  2001-11-01       Impact factor: 11.598

3.  Structure and mechanism of the UvrA-UvrB DNA damage sensor.

Authors:  Danaya Pakotiprapha; Martin Samuels; Koning Shen; Johnny H Hu; David Jeruzalmi
Journal:  Nat Struct Mol Biol       Date:  2012-02-05       Impact factor: 15.369

4.  Crystal structure of Bacillus stearothermophilus UvrA provides insight into ATP-modulated dimerization, UvrB interaction, and DNA binding.

Authors:  Danaya Pakotiprapha; Yoshihiko Inuzuka; Brian R Bowman; Geri F Moolenaar; Nora Goosen; David Jeruzalmi; Gregory L Verdine
Journal:  Mol Cell       Date:  2007-12-27       Impact factor: 17.970

5.  Inhibition of parvovirus minute virus of mice replication by a peptide involved in the oligomerization of nonstructural protein NS1.

Authors:  A Pujol; L Deleu; J P Nüesch; C Cziepluch; J C Jauniaux; J Rommelaere
Journal:  J Virol       Date:  1997-10       Impact factor: 5.103

Review 6.  Viral proteins containing the purine NTP-binding sequence pattern.

Authors:  A E Gorbalenya; E V Koonin
Journal:  Nucleic Acids Res       Date:  1989-11-11       Impact factor: 16.971

7.  The ATPase mechanism of UvrA2 reveals the distinct roles of proximal and distal ATPase sites in nucleotide excision repair.

Authors:  Brandon C Case; Silas Hartley; Memie Osuga; David Jeruzalmi; Manju M Hingorani
Journal:  Nucleic Acids Res       Date:  2019-05-07       Impact factor: 16.971

8.  DNA damage-dependent recruitment of nucleotide excision repair and transcription proteins to Escherichia coli inner membranes.

Authors:  C G Lin; O Kovalsky; L Grossman
Journal:  Nucleic Acids Res       Date:  1997-08-01       Impact factor: 16.971

9.  ATP-dependent partitioning of the DNA template into supercoiled domains by Escherichia coli UvrAB.

Authors:  H S Koo; L Claassen; L Grossman; L F Liu
Journal:  Proc Natl Acad Sci U S A       Date:  1991-02-15       Impact factor: 11.205

10.  Specific mutation of a regulatory site within the ATP-binding region of simian virus 40 large T antigen.

Authors:  B M Weiner; M K Bradley
Journal:  J Virol       Date:  1991-09       Impact factor: 5.103

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.