Literature DB >> 30338152

Deep learning based detection of cone photoreceptors with multimodal adaptive optics scanning light ophthalmoscope images of achromatopsia.

David Cunefare1, Christopher S Langlo2, Emily J Patterson3, Sarah Blau1, Alfredo Dubra4, Joseph Carroll2,3, Sina Farsiu1,5.   

Abstract

Fast and reliable quantification of cone photoreceptors is a bottleneck in the clinical utilization of adaptive optics scanning light ophthalmoscope (AOSLO) systems for the study, diagnosis, and prognosis of retinal diseases. To-date, manual grading has been the sole reliable source of AOSLO quantification, as no automatic method has been reliably utilized for cone detection in real-world low-quality images of diseased retina. We present a novel deep learning based approach that combines information from both the confocal and non-confocal split detector AOSLO modalities to detect cones in subjects with achromatopsia. Our dual-mode deep learning based approach outperforms the state-of-the-art automated techniques and is on a par with human grading.

Entities:  

Keywords:  (100.2960) Image analysis; (100.4996) Pattern recognition, neural networks; (110.1080) Active or adaptive optics; (170.4470) Ophthalmology

Year:  2018        PMID: 30338152      PMCID: PMC6191607          DOI: 10.1364/BOE.9.003740

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.562


  64 in total

1.  In vivo imaging of the photoreceptor mosaic in retinal dystrophies and correlations with visual function.

Authors:  Stacey S Choi; Nathan Doble; Joseph L Hardy; Steven M Jones; John L Keltner; Scot S Olivier; John S Werner
Journal:  Invest Ophthalmol Vis Sci       Date:  2006-05       Impact factor: 4.799

2.  Genotype-dependent variability in residual cone structure in achromatopsia: toward developing metrics for assessing cone health.

Authors:  Adam M Dubis; Robert F Cooper; Jonathan Aboshiha; Christopher S Langlo; Venki Sundaram; Benjamin Liu; Frederick Collison; Gerald A Fishman; Anthony T Moore; Andrew R Webster; Alfredo Dubra; Joseph Carroll; Michel Michaelides
Journal:  Invest Ophthalmol Vis Sci       Date:  2014-10-02       Impact factor: 4.799

3.  Development and Validation of a Deep Learning Algorithm for Detection of Diabetic Retinopathy in Retinal Fundus Photographs.

Authors:  Varun Gulshan; Lily Peng; Marc Coram; Martin C Stumpe; Derek Wu; Arunachalam Narayanaswamy; Subhashini Venugopalan; Kasumi Widner; Tom Madams; Jorge Cuadros; Ramasamy Kim; Rajiv Raman; Philip C Nelson; Jessica L Mega; Dale R Webster
Journal:  JAMA       Date:  2016-12-13       Impact factor: 56.272

4.  Deblurring adaptive optics retinal images using deep convolutional neural networks.

Authors:  Xiao Fei; Junlei Zhao; Haoxin Zhao; Dai Yun; Yudong Zhang
Journal:  Biomed Opt Express       Date:  2017-11-16       Impact factor: 3.732

5.  ReLayNet: retinal layer and fluid segmentation of macular optical coherence tomography using fully convolutional networks.

Authors:  Abhijit Guha Roy; Sailesh Conjeti; Sri Phani Krishna Karri; Debdoot Sheet; Amin Katouzian; Christian Wachinger; Nassir Navab
Journal:  Biomed Opt Express       Date:  2017-07-13       Impact factor: 3.732

6.  Automated Photoreceptor Cell Identification on Nonconfocal Adaptive Optics Images Using Multiscale Circular Voting.

Authors:  Jianfei Liu; HaeWon Jung; Alfredo Dubra; Johnny Tam
Journal:  Invest Ophthalmol Vis Sci       Date:  2017-09-01       Impact factor: 4.799

7.  Reliability and Repeatability of Cone Density Measurements in Patients with Congenital Achromatopsia.

Authors:  Mortada A Abozaid; Christopher S Langlo; Adam M Dubis; Michel Michaelides; Sergey Tarima; Joseph Carroll
Journal:  Adv Exp Med Biol       Date:  2016       Impact factor: 2.622

8.  High-resolution imaging with adaptive optics in patients with inherited retinal degeneration.

Authors:  Jacque L Duncan; Yuhua Zhang; Jarel Gandhi; Chiaki Nakanishi; Mohammad Othman; Kari E H Branham; Anand Swaroop; Austin Roorda
Journal:  Invest Ophthalmol Vis Sci       Date:  2007-07       Impact factor: 4.799

9.  Reflective afocal broadband adaptive optics scanning ophthalmoscope.

Authors:  Alfredo Dubra; Yusufu Sulai
Journal:  Biomed Opt Express       Date:  2011-05-27       Impact factor: 3.732

10.  The use of forward scatter to improve retinal vascular imaging with an adaptive optics scanning laser ophthalmoscope.

Authors:  Toco Y P Chui; Dean A Vannasdale; Stephen A Burns
Journal:  Biomed Opt Express       Date:  2012-09-13       Impact factor: 3.732

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  20 in total

1.  Comparison of confocal and non-confocal split-detection cone photoreceptor imaging.

Authors:  Nripun Sredar; Moataz Razeen; Bartlomiej Kowalski; Joseph Carroll; Alfredo Dubra
Journal:  Biomed Opt Express       Date:  2021-01-08       Impact factor: 3.732

2.  Automated identification of cone photoreceptors in adaptive optics optical coherence tomography images using transfer learning.

Authors:  Morgan Heisler; Myeong Jin Ju; Mahadev Bhalla; Nathan Schuck; Arman Athwal; Eduardo V Navajas; Mirza Faisal Beg; Marinko V Sarunic
Journal:  Biomed Opt Express       Date:  2018-10-10       Impact factor: 3.732

3.  SPATIALLY INFORMED CNN FOR AUTOMATED CONE DETECTION IN ADAPTIVE OPTICS RETINAL IMAGES.

Authors:  Heng Jin; Jessica I W Morgan; James C Gee; Min Chen
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2020-05-22

4.  Interocular Symmetry of Foveal Cone Topography in Congenital Achromatopsia.

Authors:  Katie M Litts; Michalis Georgiou; Christopher S Langlo; Emily J Patterson; Rebecca R Mastey; Angelos Kalitzeos; Rachel E Linderman; Byron L Lam; Gerald A Fishman; Mark E Pennesi; Christine N Kay; William W Hauswirth; Michel Michaelides; Joseph Carroll
Journal:  Curr Eye Res       Date:  2020-03-13       Impact factor: 2.424

5.  Open-source, machine and deep learning-based automated algorithm for gestational age estimation through smartphone lens imaging.

Authors:  Arjun D Desai; Chunlei Peng; Leyuan Fang; Dibyendu Mukherjee; Andrew Yeung; Stephanie J Jaffe; Jennifer B Griffin; Sina Farsiu
Journal:  Biomed Opt Express       Date:  2018-11-07       Impact factor: 3.732

6.  Open-source deep learning-based automatic segmentation of mouse Schlemm's canal in optical coherence tomography images.

Authors:  Kevin C Choy; Guorong Li; W Daniel Stamer; Sina Farsiu
Journal:  Exp Eye Res       Date:  2021-11-16       Impact factor: 3.467

7.  Spatially Aware Dense-LinkNet Based Regression Improves Fluorescent Cell Detection in Adaptive Optics Ophthalmic Images.

Authors:  Jianfei Liu; Yoo-Jean Han; Tao Liu; Nancy Aguilera; Johnny Tam
Journal:  IEEE J Biomed Health Inform       Date:  2020-12-04       Impact factor: 5.772

8.  Open-Source Automatic Segmentation of Ocular Structures and Biomarkers of Microbial Keratitis on Slit-Lamp Photography Images Using Deep Learning.

Authors:  Jessica Loo; Matthias F Kriegel; Megan M Tuohy; Kyeong Hwan Kim; Venkatesh Prajna; Maria A Woodward; Sina Farsiu
Journal:  IEEE J Biomed Health Inform       Date:  2021-01-05       Impact factor: 5.772

9.  Automatic Detection of Cone Photoreceptors With Fully Convolutional Networks.

Authors:  Jared Hamwood; David Alonso-Caneiro; Danuta M Sampson; Michael J Collins; Fred K Chen
Journal:  Transl Vis Sci Technol       Date:  2019-11-12       Impact factor: 3.283

10.  Emulated retinal image capture (ERICA) to test, train and validate processing of retinal images.

Authors:  Laura K Young; Hannah E Smithson
Journal:  Sci Rep       Date:  2021-05-27       Impact factor: 4.379

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