Literature DB >> 30297837

Formation of the β-barrel assembly machinery complex in lipid bilayers as seen by solid-state NMR.

Cecilia Pinto1, Deni Mance1,2, Tessa Sinnige1,3, Mark Daniëls1, Markus Weingarth1, Marc Baldus4.   

Abstract

The β-barrel assembly machinery (BAM) is a pentameric complex (BamA-E), which catalyzes the essential process of β-barrel protein insertion into the outer membrane of E. coli. Thus far, a detailed understanding of the insertion mechanism has been elusive but recent results suggest that local protein motion, in addition to the surrounding membrane environment, may be of critical relevance. We have devised a high-sensitivity solid-state NMR approach to directly probe protein motion and the structural changes associated with BAM complex assembly in lipid bilayers. Our results reveal how essential BamA domains, such as the interface formed by the polypeptide transport associated domains P4 and P5 become stabilized after complex formation and suggest that BamA β-barrel opening and P5 reorientation is directly related to complex formation in membranes. Both the lateral gate, as well as P5, exhibit local dynamics, a property that could play an integral role in substrate recognition and insertion.

Entities:  

Mesh:

Substances:

Year:  2018        PMID: 30297837      PMCID: PMC6175958          DOI: 10.1038/s41467-018-06466-w

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  59 in total

1.  Substitutions in the BamA β-barrel domain overcome the conditional lethal phenotype of a ΔbamB ΔbamE strain of Escherichia coli.

Authors:  Rene Tellez; Rajeev Misra
Journal:  J Bacteriol       Date:  2011-10-28       Impact factor: 3.490

2.  Membranes are more mosaic than fluid.

Authors:  Donald M Engelman
Journal:  Nature       Date:  2005-12-01       Impact factor: 49.962

3.  Low-power decoupling at high spinning frequencies in high static fields.

Authors:  Markus Weingarth; Geoffrey Bodenhausen; Piotr Tekely
Journal:  J Magn Reson       Date:  2009-05-03       Impact factor: 2.229

4.  Characterization of a stalled complex on the β-barrel assembly machine.

Authors:  James Lee; Mingyu Xue; Joseph S Wzorek; Tao Wu; Marcin Grabowicz; Luisa S Gronenberg; Holly A Sutterlin; Rebecca M Davis; Natividad Ruiz; Thomas J Silhavy; Daniel E Kahne
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-20       Impact factor: 11.205

5.  Proton-detected solid-state NMR reveals intramembrane polar networks in a seven-helical transmembrane protein proteorhodopsin.

Authors:  Meaghan E Ward; Lichi Shi; Evelyn Lake; Sridevi Krishnamurthy; Howard Hutchins; Leonid S Brown; Vladimir Ladizhansky
Journal:  J Am Chem Soc       Date:  2011-10-07       Impact factor: 15.419

Review 6.  Perspectives in enzymology of membrane proteins by solid-state NMR.

Authors:  Sandra J Ullrich; Clemens Glaubitz
Journal:  Acc Chem Res       Date:  2013-06-07       Impact factor: 22.384

7.  EGFR Dynamics Change during Activation in Native Membranes as Revealed by NMR.

Authors:  Mohammed Kaplan; Siddarth Narasimhan; Cecilia de Heus; Deni Mance; Sander van Doorn; Klaartje Houben; Dušan Popov-Čeleketić; Reinier Damman; Eugene A Katrukha; Purvi Jain; Willie J C Geerts; Albert J R Heck; Gert E Folkers; Lukas C Kapitein; Simone Lemeer; Paul M P van Bergen En Henegouwen; Marc Baldus
Journal:  Cell       Date:  2016-11-10       Impact factor: 41.582

8.  Structural insight into the biogenesis of β-barrel membrane proteins.

Authors:  Nicholas Noinaj; Adam J Kuszak; James C Gumbart; Petra Lukacik; Hoshing Chang; Nicole C Easley; Trevor Lithgow; Susan K Buchanan
Journal:  Nature       Date:  2013-09-01       Impact factor: 49.962

9.  Reconstitution of bacterial autotransporter assembly using purified components.

Authors:  Giselle Roman-Hernandez; Janine H Peterson; Harris D Bernstein
Journal:  Elife       Date:  2014-09-02       Impact factor: 8.140

10.  Structure of the SecY channel during initiation of protein translocation.

Authors:  Eunyong Park; Jean-François Ménétret; James C Gumbart; Steven J Ludtke; Weikai Li; Andrew Whynot; Tom A Rapoport; Christopher W Akey
Journal:  Nature       Date:  2013-10-23       Impact factor: 49.962

View more
  11 in total

1.  Characterizing proteins in a native bacterial environment using solid-state NMR spectroscopy.

Authors:  Siddarth Narasimhan; Cecilia Pinto; Alessandra Lucini Paioni; Johan van der Zwan; Gert E Folkers; Marc Baldus
Journal:  Nat Protoc       Date:  2021-01-13       Impact factor: 13.491

Review 2.  Use of paramagnetic systems to speed-up NMR data acquisition and for structural and dynamic studies.

Authors:  Vojč Kocman; Giacomo M Di Mauro; Gianluigi Veglia; Ayyalusamy Ramamoorthy
Journal:  Solid State Nucl Magn Reson       Date:  2019-07-12       Impact factor: 2.293

3.  Production and Preparation of Isotopically Labeled Human Membrane Proteins in Pichia pastoris for Fast-MAS-NMR Analyses.

Authors:  Lina Barret; Tobias Schubeis; Valérie Kugler; Lucile Guyot; Guido Pintacuda; Renaud Wagner
Journal:  Methods Mol Biol       Date:  2022

4.  Magnetic Alignment of Polymer Nanodiscs Probed by Solid-State NMR Spectroscopy.

Authors:  Thirupathi Ravula; JaeWoong Kim; Dong-Kuk Lee; Ayyalusamy Ramamoorthy
Journal:  Langmuir       Date:  2020-01-30       Impact factor: 3.882

5.  Multi-receiver solid-state NMR using polarization optimized experiments (POE) at ultrafast magic angle spinning.

Authors:  T Gopinath; Daniel K Weber; Gianluigi Veglia
Journal:  J Biomol NMR       Date:  2020-04-24       Impact factor: 2.835

6.  Proton-Detected Solid-State NMR of the Cell-Free Synthesized α-Helical Transmembrane Protein NS4B from Hepatitis C Virus.

Authors:  Vlastimil Jirasko; Nils-Alexander Lakomek; Susanne Penzel; Marie-Laure Fogeron; Ralf Bartenschlager; Beat H Meier; Anja Böckmann
Journal:  Chembiochem       Date:  2020-02-20       Impact factor: 3.164

7.  Bacterial outer membrane proteins assemble via asymmetric interactions with the BamA β-barrel.

Authors:  Matthew T Doyle; Harris D Bernstein
Journal:  Nat Commun       Date:  2019-07-26       Impact factor: 14.919

8.  Endogenous membrane stress induces T6SS activity in Pseudomonas aeruginosa.

Authors:  Anne-Sophie Stolle; Bradley Thomas Meader; Jonida Toska; John J Mekalanos
Journal:  Proc Natl Acad Sci U S A       Date:  2020-12-21       Impact factor: 11.205

9.  Integrative modeling of membrane-associated protein assemblies.

Authors:  Jorge Roel-Touris; Brian Jiménez-García; Alexandre M J J Bonvin
Journal:  Nat Commun       Date:  2020-12-04       Impact factor: 14.919

Review 10.  Metabolomics and health: from nutritional crops and plant-based pharmaceuticals to profiling of human biofluids.

Authors:  Andrey S Marchev; Liliya V Vasileva; Kristiana M Amirova; Martina S Savova; Zhivka P Balcheva-Sivenova; Milen I Georgiev
Journal:  Cell Mol Life Sci       Date:  2021-08-19       Impact factor: 9.261

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.