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Literature DB >> 3024104

Genomic localization of hepatitis B virus in a human hepatoma cell line.

M Zerial, J Salinas, J Filipski, G Bernardi.

Abstract

The integration of hepatitis B viral sequences in the human hepatoma Alexander cell line has been investigated after fractionation of the cell line DNA by centrifugation in a Cs2SO4/BAMD (3,6-(bis-acetato mercurimethyl) dioxane) density gradient. Eight out of nine integrated viral sequences were localized in DNA component H3, which only represents 4% of the human genome and matches the base composition of HBV sequences. These results indicate a targeting and/or a higher stability of the latter in a specific, small compartment of the host genome.

Entities: Chemical Disease Species

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Year: 1986 PMID： 3024104 PMCID： PMC311865 DOI： 10.1093/nar/14.21.8373

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

20 in total

1. Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.

Authors: P W Rigby; M Dieckmann; C Rhodes; P Berg
Journal: J Mol Biol Date: 1977-06-15 Impact factor: 5.469

2. An analysis of the bovine genome by density-gradient centrifugation. Preparation of the dG+dC-rich DNA components.

Authors: G Macaya; J Cortadas; G Bernardi
Journal: Eur J Biochem Date: 1978-03

3. Sequence organization and genomic distribution of the major family of interspersed repeats of mouse DNA.

Authors: M Meunier-Rotival; P Soriano; G Cuny; F Strauss; G Bernardi
Journal: Proc Natl Acad Sci U S A Date: 1982-01 Impact factor: 11.205

4. Hepatitis B virus DNA integration in a sequence homologous to v-erb-A and steroid receptor genes in a hepatocellular carcinoma.

Authors: A Dejean; L Bougueleret; K H Grzeschik; P Tiollais
Journal: Nature Date: 1986 Jul 3-9 Impact factor: 49.962

5. Integration of bovine leukemia virus DNA in the bovine genome.

Authors: R Kettmann; M Meunier-Rotival; J Cortadas; G Cuny; J Ghysdael; M Mammerickx; A Burny; G Bernardi
Journal: Proc Natl Acad Sci U S A Date: 1979-10 Impact factor: 11.205

6. The distribution of interspersed repeats is nonuniform and conserved in the mouse and human genomes.

Authors: P Soriano; M Meunier-Rotival; G Bernardi
Journal: Proc Natl Acad Sci U S A Date: 1983-04 Impact factor: 11.205

7. Nucleotide sequence of the hepatitis B virus genome (subtype ayw) cloned in E. coli.

Authors: F Galibert; E Mandart; F Fitoussi; P Tiollais; P Charnay
Journal: Nature Date: 1979-10-25 Impact factor: 49.962

8. Establishment of a continuously growing cell line from primary carcinoma of the liver.

Authors: J J Alexander; E M Bey; E W Geddes; G Lecatsas
Journal: S Afr Med J Date: 1976-12-18

9. The complete nucleotide sequences of the cloned hepatitis B virus DNA; subtype adr and adw.

Authors: Y Ono; H Onda; R Sasada; K Igarashi; Y Sugino; K Nishioka
Journal: Nucleic Acids Res Date: 1983-03-25 Impact factor: 16.971

10. The major components of the mouse and human genomes. 1. Preparation, basic properties and compositional heterogeneity.

Authors: G Cuny; P Soriano; G Macaya; G Bernardi
Journal: Eur J Biochem Date: 1981-04

12 in total

Review 9. Binding to the DNA minor groove by heterocyclic dications: from AT-specific monomers to GC recognition with dimers.

Authors: Rupesh Nanjunda; W David Wilson
Journal: Curr Protoc Nucleic Acid Chem Date: 2012-12

10. Compositional genome contexts affect gene expression control in sea urchin embryo.

Authors: Abdullah Al Mahmud; Gabriele Amore; Giorgio Bernardi
Journal: PLoS One Date: 2008-12-29 Impact factor: 3.240

Genomic localization of hepatitis B virus in a human hepatoma cell line.

1. Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.

2. An analysis of the bovine genome by density-gradient centrifugation. Preparation of the dG+dC-rich DNA components.

3. Sequence organization and genomic distribution of the major family of interspersed repeats of mouse DNA.

4. Hepatitis B virus DNA integration in a sequence homologous to v-erb-A and steroid receptor genes in a hepatocellular carcinoma.

5. Integration of bovine leukemia virus DNA in the bovine genome.

6. The distribution of interspersed repeats is nonuniform and conserved in the mouse and human genomes.

7. Nucleotide sequence of the hepatitis B virus genome (subtype ayw) cloned in E. coli.

8. Establishment of a continuously growing cell line from primary carcinoma of the liver.

9. The complete nucleotide sequences of the cloned hepatitis B virus DNA; subtype adr and adw.

10. The major components of the mouse and human genomes. 1. Preparation, basic properties and compositional heterogeneity.

1. Rearrangement of a common cellular DNA domain on chromosome 4 in human primary liver tumors.

2. The compositional properties of human genes.

3. Compositional constraints and genome evolution.

4. Human satellite-III DNA: an example of a "macrosatellite" polymorphism.

5. Nonrandom distribution of MMTV proviral sequences in the mouse genome.

6. Localization of HTLV-1 and HIV-1 proviral sequences in chromosomes of persistently infected cells.

7. Host sequences flanking the human T-cell leukemia virus type 1 provirus in vivo.

8. Structure and expression of integrated hepatitis B virus genes in an HBs antigen producing human cell line (huGK-14).

Review 9. Binding to the DNA minor groove by heterocyclic dications: from AT-specific monomers to GC recognition with dimers.

10. Compositional genome contexts affect gene expression control in sea urchin embryo.