Literature DB >> 30230009

TensorView: A software tool for displaying NMR tensors.

Robert P Young1, Corbin R Lewis1, Chen Yang1, Luther Wang2, James K Harper2, Leonard J Mueller1.   

Abstract

The representation of nuclear magnetic resonance (NMR) tensors as surfaces on three-dimensional molecular models is an information-rich presentation that highlights the geometric relationship between tensor principal components and the underlying molecular and electronic structure. Here, we describe a new computational tool, TensorView, for depicting NMR tensors on the molecular framework. This package makes use of the graphical interface and built-in molecular display functionality present within the Mathematica programming environment and is robust for displaying tensor properties from a broad range of commercial and user-specific computational chemistry packages. Two mathematical forms for representing tensor interaction surfaces are presented, the popular ellipsoidal construct and the more technically correct "ovaloid" form. Examples are provided for chemical shielding and shift tensors, dipole-dipole and quadrupolar couplings, and atomic anisotropic displacement parameters (thermal ellipsoids) derived from NMR crystallography.
© 2018 John Wiley & Sons, Ltd.

Entities:  

Keywords:  ellipsoid; ovaloid; second-rank Cartesian tensor; shielding surface; solid-state NMR; tensor

Year:  2018        PMID: 30230009      PMCID: PMC6736611          DOI: 10.1002/mrc.4793

Source DB:  PubMed          Journal:  Magn Reson Chem        ISSN: 0749-1581            Impact factor:   2.447


  27 in total

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4.  De novo determination of the crystal structure of a large drug molecule by crystal structure prediction-based powder NMR crystallography.

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5.  Converging nuclear magnetic shielding calculations with respect to basis and system size in protein systems.

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7.  A standard format and a graphical user interface for spin system specification.

Authors:  A G Biternas; G T P Charnock; Ilya Kuprov
Journal:  J Magn Reson       Date:  2014-01-22       Impact factor: 2.229

8.  Predicting anisotropic thermal displacements for hydrogens from solid-state NMR: a study on hydrogen bonding in polymorphs of palmitic acid.

Authors:  Luther Wang; Fernando J Uribe-Romo; Leonard J Mueller; James K Harper
Journal:  Phys Chem Chem Phys       Date:  2018-03-28       Impact factor: 3.676

9.  On the pictorial representation of the magnetic screening tensor: ellipsoid or ovaloid?

Authors:  R Radeglia
Journal:  Solid State Nucl Magn Reson       Date:  1995-07       Impact factor: 2.293

Review 10.  NMR crystallography: structure and properties of materials from solid-state nuclear magnetic resonance observables.

Authors:  David L Bryce
Journal:  IUCrJ       Date:  2017-05-02       Impact factor: 4.769

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4.  Bridging photochemistry and photomechanics with NMR crystallography: the molecular basis for the macroscopic expansion of an anthracene ester nanorod.

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