Literature DB >> 30217843

Coordinated Biosynthesis of the Purine Nucleoside Antibiotics Aristeromycin and Coformycin in Actinomycetes.

Gudan Xu1, Liyuan Kong1,2, Rong Gong1, Liudong Xu3, Yaojie Gao3, Ming Jiang3, You-Sheng Cai1, Kui Hong1, Youcai Hu2, Peng Liu1, Zixin Deng1,3, Neil P J Price4, Wenqing Chen5,2,3.   

Abstract

Purine nucleoside antibiotic pairs, concomitantly produced by a single strain, are an important group of microbial natural products. Here, we report a target-directed genome mining approach to elucidate the biosynthesis of the purine nucleoside antibiotic pair aristeromycin (ARM) and coformycin (COF) in Micromonospora haikouensis DSM 45626 (a new producer for ARM and COF) and Streptomyces citricolor NBRC 13005 (a new COF producer). We also provide biochemical data that MacI and MacT function as unusual phosphorylases, catalyzing an irreversible reaction for the tailoring assembly of neplanocin A (NEP-A) and ARM. Moreover, we demonstrate that MacQ is shown to be an adenosine-specific deaminase, likely relieving the potential "excess adenosine" for producing cells. Finally, we report that MacR, an annotated IMP dehydrogenase, is actually an NADPH-dependent GMP reductase, which potentially plays a salvage role for the efficient supply of the precursor pool. Hence, these findings illustrate a fine-tuned pathway for the biosynthesis of ARM and also open the way for the rational search for purine antibiotic pairs.IMPORTANCE ARM and COF are well known for their prominent biological activities and unusual chemical structures; however, the logic of their biosynthesis has long been poorly understood. Actually, the new insights into the ARM and COF pathway will not only enrich the biochemical repertoire for interesting enzymatic reactions but may also lay a solid foundation for the combinatorial biosynthesis of this group of antibiotics via a target-directed genome mining strategy.
Copyright © 2018 American Society for Microbiology.

Entities:  

Keywords:  actinomycetes; aristeromycin; coformycin; coordinated biosynthesis; fine-tuned pathway

Mesh:

Substances:

Year:  2018        PMID: 30217843      PMCID: PMC6210108          DOI: 10.1128/AEM.01860-18

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  28 in total

1.  Identification of the gene cluster involved in muraymycin biosynthesis from Streptomyces sp. NRRL 30471.

Authors:  Lin Cheng; Wenqing Chen; Lipeng Zhai; Dongmei Xu; Tingting Huang; Shuangjun Lin; Xiufen Zhou; Zixin Deng
Journal:  Mol Biosyst       Date:  2010-12-23

Review 2.  Nucleoside antibiotics: structure, biological activity, and biosynthesis.

Authors:  K Isono
Journal:  J Antibiot (Tokyo)       Date:  1988-12       Impact factor: 2.649

3.  Structure of coformycin, an unusual nucleoside of microbial origin.

Authors:  H Nakamura; G Koyama; Y Iitaka; M Ono; N Yagiawa
Journal:  J Am Chem Soc       Date:  1974-06-26       Impact factor: 15.419

4.  Streptomyces citricolor nov. sp. and a new antibiotic, aristeromycin.

Authors:  T Kusaka; H Yamamoto; M Shibata; M Muroi; T Kishi
Journal:  J Antibiot (Tokyo)       Date:  1968-04       Impact factor: 2.649

5.  An Unusual Protector-Protégé Strategy for the Biosynthesis of Purine Nucleoside Antibiotics.

Authors:  Pan Wu; Dan Wan; Gudan Xu; Gui Wang; Hongmin Ma; Tingting Wang; Yaojie Gao; Jianzhao Qi; Xiaoxia Chen; Jian Zhu; Yong-Quan Li; Zixin Deng; Wenqing Chen
Journal:  Cell Chem Biol       Date:  2017-01-19       Impact factor: 8.116

Review 6.  Natural and engineered biosynthesis of nucleoside antibiotics in Actinomycetes.

Authors:  Wenqing Chen; Jianzhao Qi; Pan Wu; Dan Wan; Jin Liu; Xuan Feng; Zixin Deng
Journal:  J Ind Microbiol Biotechnol       Date:  2015-07-08       Impact factor: 3.346

7.  Studies on neplanocin A, new antitumor antibiotic. I. Producing organism, isolation and characterization.

Authors:  S Yaginuma; N Muto; M Tsujino; Y Sudate; M Hayashi; M Otani
Journal:  J Antibiot (Tokyo)       Date:  1981-04       Impact factor: 2.649

8.  Deciphering Carbamoylpolyoxamic Acid Biosynthesis Reveals Unusual Acetylation Cycle Associated with Tandem Reduction and Sequential Hydroxylation.

Authors:  Jianzhao Qi; Dan Wan; Hongmin Ma; Yuanzhen Liu; Rong Gong; Xudong Qu; Yuhui Sun; Zixin Deng; Wenqing Chen
Journal:  Cell Chem Biol       Date:  2016-08-18       Impact factor: 8.116

Review 9.  Microbial genome mining for accelerated natural products discovery: is a renaissance in the making?

Authors:  Brian O Bachmann; Steven G Van Lanen; Richard H Baltz
Journal:  J Ind Microbiol Biotechnol       Date:  2013-12-17       Impact factor: 3.346

10.  A genomics-led approach to deciphering the mechanism of thiotetronate antibiotic biosynthesis.

Authors:  W Tao; M E Yurkovich; S Wen; K E Lebe; M Samborskyy; Y Liu; A Yang; Y Liu; Y Ju; Z Deng; M Tosin; Y Sun; P F Leadlay
Journal:  Chem Sci       Date:  2015-10-08       Impact factor: 9.825

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  5 in total

1.  Synthesis and anti-HBV activity of carbocyclic nucleoside hybrids with salient features of entecavir and aristeromycin.

Authors:  Ramakrishnamraju Samunuri; Masaaki Toyama; Renuka Sivasankar Pallaka; Seshubabu Neeladri; Ashok Kumar Jha; Masanori Baba; Chandralata Bal
Journal:  RSC Med Chem       Date:  2020-05-15

2.  Comparative Investigation into Formycin A and Pyrazofurin A Biosynthesis Reveals Branch Pathways for the Construction of C-Nucleoside Scaffolds.

Authors:  Meng Zhang; Peichao Zhang; Gudan Xu; Wenting Zhou; Yaojie Gao; Rong Gong; You-Sheng Cai; Hengjiang Cong; Zixin Deng; Neil P J Price; Xiangzhao Mao; Wenqing Chen
Journal:  Appl Environ Microbiol       Date:  2020-01-07       Impact factor: 4.792

3.  A New Micromonospora Strain with Antibiotic Activity Isolated from the Microbiome of a Mid-Atlantic Deep-Sea Sponge.

Authors:  Catherine R Back; Henry L Stennett; Sam E Williams; Luoyi Wang; Jorge Ojeda Gomez; Omar M Abdulle; Thomas Duffy; Christopher Neal; Judith Mantell; Mark A Jepson; Katharine R Hendry; David Powell; James E M Stach; Angela E Essex-Lopresti; Christine L Willis; Paul Curnow; Paul R Race
Journal:  Mar Drugs       Date:  2021-02-11       Impact factor: 6.085

4.  Characterization of NucPNP and NucV involved in the early steps of nucleocidin biosynthesis in Streptomyces calvus.

Authors:  Utumporn Ngivprom; Surayut Kluaiphanngam; Wenjuan Ji; Siriwalee Siriwibool; Anyanee Kamkaew; James R Ketudat Cairns; Qi Zhang; Rung-Yi Lai
Journal:  RSC Adv       Date:  2021-01-15       Impact factor: 3.361

Review 5.  Advances in Biosynthesis of Natural Products from Marine Microorganisms.

Authors:  Quan Zhou; Kinya Hotta; Yaming Deng; Rui Yuan; Shu Quan; Xi Chen
Journal:  Microorganisms       Date:  2021-12-10
  5 in total

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