Literature DB >> 26153500

Natural and engineered biosynthesis of nucleoside antibiotics in Actinomycetes.

Wenqing Chen1, Jianzhao Qi1, Pan Wu1, Dan Wan1, Jin Liu1, Xuan Feng1, Zixin Deng2,3.   

Abstract

Nucleoside antibiotics constitute an important family of microbial natural products bearing diverse bioactivities and unusual structural features. Their biosynthetic logics are unique with involvement of complex multi-enzymatic reactions leading to the intricate molecules from simple building blocks. Understanding how nature builds this family of antibiotics in post-genomic era sets the stage for rational enhancement of their production, and also paves the way for targeted persuasion of the cell factories to make artificial designer nucleoside drugs and leads via synthetic biology approaches. In this review, we discuss the recent progress and perspectives on the natural and engineered biosynthesis of nucleoside antibiotics.

Entities:  

Keywords:  Natural products; Nucleoside antibiotics; Post-genomic era; Synthetic biology

Mesh:

Substances:

Year:  2015        PMID: 26153500     DOI: 10.1007/s10295-015-1636-3

Source DB:  PubMed          Journal:  J Ind Microbiol Biotechnol        ISSN: 1367-5435            Impact factor:   3.346


  95 in total

1.  Identification of the gene cluster involved in muraymycin biosynthesis from Streptomyces sp. NRRL 30471.

Authors:  Lin Cheng; Wenqing Chen; Lipeng Zhai; Dongmei Xu; Tingting Huang; Shuangjun Lin; Xiufen Zhou; Zixin Deng
Journal:  Mol Biosyst       Date:  2010-12-23

2.  polR, a pathway-specific transcriptional regulatory gene, positively controls polyoxin biosynthesis in Streptomyces cacaoi subsp. asoensis.

Authors:  Rui Li; Zhoujie Xie; Yuqing Tian; Haihua Yang; Wenqing Chen; Delin You; Gang Liu; Zixin Deng; Huarong Tan
Journal:  Microbiology       Date:  2009-04-21       Impact factor: 2.777

3.  Characterization of the amicetin biosynthesis gene cluster from Streptomyces vinaceusdrappus NRRL 2363 implicates two alternative strategies for amide bond formation.

Authors:  Gaiyun Zhang; Haibo Zhang; Sumei Li; Ji Xiao; Guangtao Zhang; Yiguang Zhu; Siwen Niu; Jianhua Ju; Changsheng Zhang
Journal:  Appl Environ Microbiol       Date:  2012-01-20       Impact factor: 4.792

4.  Biosynthesis of albomycin δ(2) provides a template for assembling siderophore and aminoacyl-tRNA synthetase inhibitor conjugates.

Authors:  Yu Zeng; Aditya Kulkarni; Zhaoyong Yang; Preeti B Patil; Wei Zhou; Xiuling Chi; Steven Van Lanen; Shawn Chen
Journal:  ACS Chem Biol       Date:  2012-06-25       Impact factor: 5.100

5.  New nikkomycins by mutasynthesis and directed fermentation.

Authors:  J Delzer; H P Fiedler; H Müller; H Zähner; R Rathmann; K Ernst; W A König
Journal:  J Antibiot (Tokyo)       Date:  1984-01       Impact factor: 2.649

6.  Genome-wide screening reveals the genetic determinants of an antibiotic insecticide in Bacillus thuringiensis.

Authors:  Xiao-Yan Liu; Li-Fang Ruan; Zhen-Fei Hu; Dong-Hai Peng; Shi-Yun Cao; Zi-Niu Yu; Yao Liu; Jin-Shui Zheng; Ming Sun
Journal:  J Biol Chem       Date:  2010-09-23       Impact factor: 5.157

7.  Identification of the biosynthetic gene cluster for the pacidamycin group of peptidyl nucleoside antibiotics.

Authors:  Wenjun Zhang; Bohdan Ostash; Christopher T Walsh
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-08       Impact factor: 11.205

8.  The blasticidin S biosynthesis gene cluster from Streptomyces griseochromogenes: sequence analysis, organization, and initial characterization.

Authors:  Martha C Cone; Xihou Yin; Laura L Grochowski; Morgan R Parker; T Mark Zabriskie
Journal:  Chembiochem       Date:  2003-09-05       Impact factor: 3.164

9.  Cloning and heterologous expression of the entire set of structural genes for nikkomycin synthesis from Streptomyces tendae Tü901 in Streptomyces lividans.

Authors:  C Bormann; V Möhrle; C Bruntner
Journal:  J Bacteriol       Date:  1996-02       Impact factor: 3.490

10.  Novel polyoxins generated by heterologously expressing polyoxin biosynthetic gene cluster in the sanN inactivated mutant of Streptomyces ansochromogenes.

Authors:  Jine Li; Lei Li; Chi Feng; Yihua Chen; Huarong Tan
Journal:  Microb Cell Fact       Date:  2012-10-08       Impact factor: 5.328

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  12 in total

Review 1.  Nature's combinatorial biosynthesis and recently engineered production of nucleoside antibiotics in Streptomyces.

Authors:  Shawn Chen; William A Kinney; Steven Van Lanen
Journal:  World J Microbiol Biotechnol       Date:  2017-03-04       Impact factor: 3.312

2.  Selective catalytic hydrogenation of the N-acyl and uridyl double bonds in the tunicamycin family of protein N-glycosylation inhibitors.

Authors:  Neil Pj Price; Michael A Jackson; Karl E Vermillion; Judith A Blackburn; Jiakun Li; Biao Yu
Journal:  J Antibiot (Tokyo)       Date:  2017-11-01       Impact factor: 2.649

3.  An ATP-Dependent Ligase with Substrate Flexibility Involved in Assembly of the Peptidyl Nucleoside Antibiotic Polyoxin.

Authors:  Rong Gong; Jianzhao Qi; Pan Wu; You-Sheng Cai; Hongmin Ma; Yang Liu; He Duan; Meng Wang; Zixin Deng; Neil P J Price; Wenqing Chen
Journal:  Appl Environ Microbiol       Date:  2018-06-18       Impact factor: 4.792

4.  Coordinated Biosynthesis of the Purine Nucleoside Antibiotics Aristeromycin and Coformycin in Actinomycetes.

Authors:  Gudan Xu; Liyuan Kong; Rong Gong; Liudong Xu; Yaojie Gao; Ming Jiang; You-Sheng Cai; Kui Hong; Youcai Hu; Peng Liu; Zixin Deng; Neil P J Price; Wenqing Chen
Journal:  Appl Environ Microbiol       Date:  2018-10-30       Impact factor: 4.792

5.  Biosynthesis of 2'-Chloropentostatin and 2'-Amino-2'-Deoxyadenosine Highlights a Single Gene Cluster Responsible for Two Independent Pathways in Actinomadura sp. Strain ATCC 39365.

Authors:  Yaojie Gao; Gudan Xu; Pan Wu; Jin Liu; You-Sheng Cai; Zixin Deng; Wenqing Chen
Journal:  Appl Environ Microbiol       Date:  2017-05-01       Impact factor: 4.792

6.  Analysis of the Pseudouridimycin Biosynthetic Pathway Provides Insights into the Formation of C-nucleoside Antibiotics.

Authors:  Margherita Sosio; Eleonora Gaspari; Marianna Iorio; Silvia Pessina; Marnix H Medema; Alice Bernasconi; Matteo Simone; Sonia I Maffioli; Richard H Ebright; Stefano Donadio
Journal:  Cell Chem Biol       Date:  2018-03-15       Impact factor: 8.116

7.  Carbon extension in peptidylnucleoside biosynthesis by radical SAM enzymes.

Authors:  Edward A Lilla; Kenichi Yokoyama
Journal:  Nat Chem Biol       Date:  2016-09-19       Impact factor: 15.040

8.  An unusual UMP C-5 methylase in nucleoside antibiotic polyoxin biosynthesis.

Authors:  Wenqing Chen; Yan Li; Jie Li; Lian Wu; Yan Li; Renxiao Wang; Zixin Deng; Jiahai Zhou
Journal:  Protein Cell       Date:  2016-07-14       Impact factor: 14.870

9.  Construction of an octosyl acid backbone catalyzed by a radical S-adenosylmethionine enzyme and a phosphatase in the biosynthesis of high-carbon sugar nucleoside antibiotics.

Authors:  Nisha He; Pan Wu; Yongxing Lei; Baofu Xu; Xiaochen Zhu; Gudan Xu; Yaojie Gao; Jianzhao Qi; Zixin Deng; Gongli Tang; Wenqing Chen; Youli Xiao
Journal:  Chem Sci       Date:  2016-08-19       Impact factor: 9.825

Review 10.  Engineering nucleoside antibiotics toward the development of novel antimicrobial agents.

Authors:  Guoqing Niu; Zhilei Li; Pengju Huang; Huarong Tan
Journal:  J Antibiot (Tokyo)       Date:  2019-09-09       Impact factor: 2.649

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