| Literature DB >> 30210752 |
Ya-Han Hu1,2, Chun-Tien Tai1,3, Chih-Fong Tsai4, Min-Wei Huang5,6.
Abstract
Digoxin is a high-alert medication because of its narrow therapeutic range and high drug-to-drug interactions (DDIs). Approximately 50% of digoxin toxicity cases are preventable, which motivated us to improve the treatment outcomes of digoxin. The objective of this study is to apply machine learning techniques to predict the appropriateness of initial digoxin dosage. A total of 307 inpatients who had their conditions treated with digoxin between 2004 and 2013 at a medical center in Taiwan were collected in the study. Ten independent variables, including demographic information, laboratory data, and whether the patients had CHF were also noted. A patient with serum digoxin concentration being controlled at 0.5-0.9 ng/mL after his/her initial digoxin dosage was defined as having an appropriate use of digoxin; otherwise, a patient was defined as having an inappropriate use of digoxin. Weka 3.7.3, an open source machine learning software, was adopted to develop prediction models. Six machine learning techniques were considered, including decision tree (C4.5), k-nearest neighbors (kNN), classification and regression tree (CART), randomForest (RF), multilayer perceptron (MLP), and logistic regression (LGR). In the non-DDI group, the area under ROC curve (AUC) of RF (0.912) was excellent, followed by that of MLP (0.813), CART (0.791), and C4.5 (0.784); the remaining classifiers performed poorly. For the DDI group, the AUC of RF (0.892) was the best, followed by CART (0.795), MLP (0.777), and C4.5 (0.774); the other classifiers' performances were less than ideal. The decision tree-based approaches and MLP exhibited markedly superior accuracy performance, regardless of DDI status. Although digoxin is a high-alert medication, its initial dose can be accurately determined by using data mining techniques such as decision tree-based and MLP approaches. Developing a dosage decision support system may serve as a supplementary tool for clinicians and also increase drug safety in clinical practice.Entities:
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Year: 2018 PMID: 30210752 PMCID: PMC6120286 DOI: 10.1155/2018/3948245
Source DB: PubMed Journal: J Healthc Eng ISSN: 2040-2295 Impact factor: 2.682
Recent studies on digoxin dosage prediction.
| Study | Sample size | Study population |
| Method | Demographic data (gender,age, TBW | SCr | ALT/AST | BUN | ALB | K+ | Dose | SDC | CHF | DDI | Num. of variables |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Albert et al. [ | 125 | Spain | Toxicity | (1) logistic regression (2) neural networks | V | V | V | V | V | V | V(5) | 7 | |||
| Bauman et al. [ | 54 | Caucasians (America) | SDC | Multiple linear regression | V | V | V | V | V(4) | 5 | |||||
| Chen et al. [ | 142 | China | CL | NONMEM | V | V | V | V | V | V | V | V(4) | 8 | ||
| Jiratham-Opas et al. [ | 114 | Thailand | SDC | Konishi equation | V | V | V | V | V | V(9) | 6 | ||||
| Kockova et al. [ | 222 | Czech Republic | Toxicity | (1) Fisher's exact test (2) logistic regression | V | V | V | V | V | V(6) | 6 | ||||
| Komatsu et al. [ | 192 | Japanese | SDC | NONMEM | V | V | V | V | V | V(11) | 6 | ||||
| Konishi et al. [ | 235 | Japanese | SDC | Hyperbolic regression model | V | V | V | V | V | 5 | |||||
| Kroese et al. [ | 45 | Caucasians (UK) | SDC | PharmDIS | V | V | V | V(3) | 4 | ||||||
| Martín et al. [ | 257 | Spain | Toxicity | Neural networks | V | V | V | V(1) | 4 | ||||||
| Martin-Suarez et al. [ | 63 | Spain | Dose | Linear regression | V | V | V | V | V | 5 | |||||
| Martin-Suarez et al. [ | 8 | Spain | Dose | NONMEM | V | V | V | V | 4 | ||||||
| Muzzarelli et al. [ | 40 | Switzerland | Dose | Konishi equation | V | V | V | V | V(8) | 5 | |||||
| Petcharattana [ | 130 | Thailand | SDC | NONMEM | V | V | V | V | V | V(6) | 6 | ||||
| Suematsu et al. [ | 172 | Japanese | CL | NONMEM | V | V | V | V | V | V(1) | 6 | ||||
| Suematsu et al. [ | 181 | Japanese | CL | Least-squares analysis | V | V | V | V | V | V(1) | 6 | ||||
| Yukawa et al. [ | 94 | Japanese | Dose | NONMEM | V | V | V | V | V | V(1) | 6 | ||||
| Yukawa et al. [ | 117 | Japanese | CL | NONMEM | V | V | V | V | V | 5 | |||||
| Yukawa et al. [ | 71 | Japanese | SDC | NONMEM | V | V | V | V | 4 | ||||||
| Yukawa et al. [ | 106 | Japanese | CL | NONMEM | V | V | V | V | V(2) | 5 | |||||
| Yukawa et al. [ | 385 | Japanese | CL | NONMEM | V | V | V | V | V | V(1) | 6 | ||||
| Zhou et al. [ | 119 | China | SDC | NONMEM | V | V | V | V | V | V | V | V | V(4) | 9 | |
| Our study | 307 | Taiwan | Dose adequacy | Machine learning methods | V | V | V | V | V | V | V | V | V | V(26) | 10 |
ALB, albumin; ALT/AST, alanine aminotransferase/aspartate aminotransferase; BUN, blood urea nitrogen; CHF, congestive heart failure; CL, the clearance of digoxin; DDIs, drug-drug interactions; Dose, digoxin daily dose; K+, serum potassium; SCr, serum creatinine; SDC, serum digoxin concentration. The number in the parentheses represents the number of DDI drugs considered in the study.
A list of medicines causing major DDI when combined with digoxin.
| Amiodarone | Dronedarone | Norepinephrine | Spironolactone |
| Alprazolam | Epinephrine | Oxytetracycline | Succinylcholine |
| Boceprevir | Erythromycin | Propafenone | Tetracycline |
| Calcium carbonate | Indomethacin | Propantheline | Thiazide diuretics |
| Clarithromycin | Itraconazole | Quinidine | Verapamil |
| Dopamine | Mifepristone | Ritonavir | |
| Doxycycline | Minocycline | Saquinavir |
Parameter settings in WEKA.
| Method | Parameters | Value/Range | Best parameter setting |
|---|---|---|---|
| J48 | Confidence factor | 0.1–0.5 | 0.25 |
| Minimum number of instances per leaf | 2–50 | 2 | |
| IBk | Number of neighbors | 2–10 | 2 |
| SimpleCART | Minimum number of instances per leaf | 2–50 | 2 |
| RandomForest | Number of trees | 5–10 | 10 |
| Number of attributes to be used in random selection | 2–8 | 4 | |
| Multilayer perceptron | Number of hidden nodes | 3–14 | 7 |
| Learning rate | 0.1–0.6 | 0.3 | |
| Momentum factor | 0–0.9 | 0.2 | |
| Maximum number of epochs | 300–1000 | 500 | |
| AdaBoostM1 | Number of iterations | 10 | 10 |
| Weight threshold for pruning | 100 | 100 |
Confusion matrix.
| Predicted class | |||
|---|---|---|---|
| Adequate | Inadequate | ||
| Actual class | Adequate |
|
|
| Inadequate |
|
| |
Summary statistics for the non-DDI and DDI groups.
| Variable | Non-DDI group | DDI group | ||
|---|---|---|---|---|
| Range | Summary statistics | Range | Summary statistics | |
| Gender | Male/female | Male: 40 | Male/female | Male: 121 |
| Female: 45 | Female: 101 | |||
| Age (years) | 38 to 94 |
| 23 to 101 |
|
| Weight (kg) | 35 to 89 |
| 33 to 105 |
|
| SDC | 0.2 to 2.4 |
| 0.2 to 4.3 |
|
| ALT | 8 to 475 |
| 5 to 1381 |
|
| AST | 17 to 1776 |
| 12 to 2615 |
|
| SCr | 0.38 to 3.55 |
| 0.29 to 12.1 |
|
| BUN | 1.9 to 83 |
| 2 to 219 |
|
| ALB | 1.4 to 4.2 |
| 1.1 to 4.2 |
|
| K+ | 2.5 to 5.4 |
| 2.69 to 6.80 |
|
| CHF | Yes/no | Yes: 35/no: 50 | Yes/no | Yes: 132/no: 90 |
Performance evaluation of the classifiers for the non-DDI and DDI groups.
| Group | Method | Sensitivity | Specificity | Accuracy | AUC |
|---|---|---|---|---|---|
| Non-DDI | C4.5 | 0.705/0.091 | 0.806/0.078 | 0.759/0.061 | 0.784/0.065 |
| CART | 0.696/0.095 | 0.825/0.067 | 0.765/0.055 | 0.791/0.057 | |
| RF | 0.782/0.090 | 0.888/0.054 | 0 0.839/0.041 | 0.912/0.032 | |
| kNN | 0.619/0.172 | 0.547/0.162 | 0.592/0.068 | 0.606/0.070 | |
| LGR | 0.566/0.145 | 0.715/0.117 | 0.648/0.078 | 0.661/0.097 | |
| MLP | 0.741/0.091 | 0.871/0.057 | 0.809/0.059 | 0.813/0.071 | |
|
| |||||
| DDI | C4.5 | 0.701/0.060 | 0.759/0.050 | 0.732/0.029 | 0.774/0.030 |
| CART | 0.728/0.051 | 0.776/0.050 | 0.754/0.031 | 0.795/0.031 | |
| RF | 0.790/0.050 | 0.817/0.043 | 0.805/0.027 | 0.892/0.020 | |
| kNN | 0.545/0.094 | 0.651/0.087 | 0.602/0.042 | 0.634/0.048 | |
| LGR | 0.464/0.139 | 0.621/0.145 | 0.551/0.042 | 0.556/0.058 | |
| MLP | 0.745/0.058 | 0.799/0.042 | 0.774/0.037 | 0.777/0.051 | |
Ranking of selected variables by gain ratio.
| Rank | Variable | Gain ratios |
|---|---|---|
| 1 | SCr | 0.0826 |
| 2 | Serum K+ | 0.0428 |
| 3 | CHF | 0.0129 |
| 4 | DDI | 0.0101 |