Literature DB >> 30200855

A New Lens for RNA Localization: Liquid-Liquid Phase Separation.

Erin M Langdon1, Amy S Gladfelter1,2.   

Abstract

RNA localization mechanisms have been intensively studied and include localized protection of mRNA from degradation, diffusion-coupled local entrapment of mRNA, and directed transport of mRNAs along the cytoskeleton. While it is well understood how cells utilize these three mechanisms to organize mRNAs within the cytoplasm, a newly appreciated mechanism of RNA localization has emerged in recent years in which mRNAs phase-separate and form liquid-like droplets. mRNAs both contribute to condensation of proteins into liquid-like structures and are themselves regulated by being incorporated into membraneless organelles. This ability to condense into droplets is in many instances contributing to previously appreciated mRNA localization phenomena. Here we review how phase separation enables mRNAs to selectively and efficiently colocalize and be coregulated, allowing control of gene expression in time and space.

Keywords:  RNA localization; cellular compartmentalization; phase separation; translation

Mesh:

Substances:

Year:  2018        PMID: 30200855     DOI: 10.1146/annurev-micro-090817-062814

Source DB:  PubMed          Journal:  Annu Rev Microbiol        ISSN: 0066-4227            Impact factor:   15.500


  40 in total

1.  Organizing the oocyte: RNA localization meets phase separation.

Authors:  Sarah E Cabral; Kimberly L Mowry
Journal:  Curr Top Dev Biol       Date:  2020-03-09       Impact factor: 4.897

2.  Liquid-Liquid Phase Separation in Physiology and Pathophysiology of the Nervous System.

Authors:  Yasunori Hayashi; Lenzie K Ford; Luana Fioriti; Leeanne McGurk; Mingjie Zhang
Journal:  J Neurosci       Date:  2021-01-20       Impact factor: 6.167

Review 3.  RNA contributions to the form and function of biomolecular condensates.

Authors:  Christine Roden; Amy S Gladfelter
Journal:  Nat Rev Mol Cell Biol       Date:  2020-07-06       Impact factor: 94.444

4.  Designer protein assemblies with tunable phase diagrams in living cells.

Authors:  Meta Heidenreich; Joseph M Georgeson; Emanuele Locatelli; Lorenzo Rovigatti; Saroj Kumar Nandi; Avital Steinberg; Yotam Nadav; Eyal Shimoni; Samuel A Safran; Jonathan P K Doye; Emmanuel D Levy
Journal:  Nat Chem Biol       Date:  2020-07-13       Impact factor: 15.040

Review 5.  Pattern Formation and Complexity in Single Cells.

Authors:  Wallace F Marshall
Journal:  Curr Biol       Date:  2020-05-18       Impact factor: 10.834

Review 6.  The functional organization of axonal mRNA transport and translation.

Authors:  Irene Dalla Costa; Courtney N Buchanan; Matthew D Zdradzinski; Pabitra K Sahoo; Terika P Smith; Elizabeth Thames; Amar N Kar; Jeffery L Twiss
Journal:  Nat Rev Neurosci       Date:  2020-12-07       Impact factor: 34.870

7.  Liquid network connectivity regulates the stability and composition of biomolecular condensates with many components.

Authors:  Jorge R Espinosa; Jerelle A Joseph; Ignacio Sanchez-Burgos; Adiran Garaizar; Daan Frenkel; Rosana Collepardo-Guevara
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-01       Impact factor: 11.205

Review 8.  Considerations and Challenges in Studying Liquid-Liquid Phase Separation and Biomolecular Condensates.

Authors:  Simon Alberti; Amy Gladfelter; Tanja Mittag
Journal:  Cell       Date:  2019-01-24       Impact factor: 41.582

Review 9.  Poly(ADP-ribose): A Dynamic Trigger for Biomolecular Condensate Formation.

Authors:  Anthony K L Leung
Journal:  Trends Cell Biol       Date:  2020-02-20       Impact factor: 20.808

Review 10.  The emergence of phase separation as an organizing principle in bacteria.

Authors:  Christopher A Azaldegui; Anthony G Vecchiarelli; Julie S Biteen
Journal:  Biophys J       Date:  2020-09-28       Impact factor: 4.033

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