| Literature DB >> 30176213 |
Joshua A Rackers1, Zhi Wang2, Chao Lu2, Marie L Laury2, Louis Lagardère3, Michael J Schnieders4, Jean-Philip Piquemal3, Pengyu Ren5, Jay W Ponder1,2.
Abstract
The Tinker software, currently released as version 8, is a modular molecular mechanics and dynamics package written primarily in a standard, easily portable dialect of Fortran 95 with OpenMP extensions. It supports a wide variety of force fields, including polarizable models such as the Atomic Multipole Optimized Energetics for Biomolecular Applications (AMOEBA) force field. The package runs on Linux, macOS, and Windows systems. In addition to canonical Tinker, there are branches, Tinker-HP and Tinker-OpenMM, designed for use on message passing interface (MPI) parallel distributed memory supercomputers and state-of-the-art graphical processing units (GPUs), respectively. The Tinker suite also includes a tightly integrated Java-based graphical user interface called Force Field Explorer (FFE), which provides molecular visualization capabilities as well as the ability to launch and control Tinker calculations.Entities:
Year: 2018 PMID: 30176213 PMCID: PMC6335969 DOI: 10.1021/acs.jctc.8b00529
Source DB: PubMed Journal: J Chem Theory Comput ISSN: 1549-9618 Impact factor: 6.006