Literature DB >> 30159229

Circular RNAs and competing endogenous RNA (ceRNA) networks.

Apratim Mitra1, Karl Pfeifer1, Ki-Sun Park1.   

Abstract

In recent years, advances in bioinformatics approaches have allowed a systematic characterization of circular RNAs (circRNAs) across a variety of cell types. Demonstration of cell type specificity, regulated expression, and conservation between species all suggest that circRNAs have functional importance. Especially, investigators have begun focusing on the possibility that circRNAs operate as part of competing endogenous RNA (ceRNA) regulatory networks that are proposed to play critical roles in normal development and in pathologic conditions like cancer.

Entities:  

Keywords:  Circular RNAs (circRNAs); ceRNA networks; miRNA; microRNAs

Year:  2018        PMID: 30159229      PMCID: PMC6110397          DOI: 10.21037/tcr.2018.05.12

Source DB:  PubMed          Journal:  Transl Cancer Res        ISSN: 2218-676X            Impact factor:   1.241


  25 in total

1.  Scrambled exons.

Authors:  J M Nigro; K R Cho; E R Fearon; S E Kern; J M Ruppert; J D Oliner; K W Kinzler; B Vogelstein
Journal:  Cell       Date:  1991-02-08       Impact factor: 41.582

2.  Circular RNA profile identifies circPVT1 as a proliferative factor and prognostic marker in gastric cancer.

Authors:  Jie Chen; Yan Li; Qiupeng Zheng; Chunyang Bao; Jian He; Bin Chen; Dongbin Lyu; Biqiang Zheng; Yu Xu; Ziwen Long; Ye Zhou; Huiyan Zhu; Yanong Wang; Xianghuo He; Yingqiang Shi; Shenglin Huang
Journal:  Cancer Lett       Date:  2016-12-13       Impact factor: 8.679

3.  Assessing the ceRNA hypothesis with quantitative measurements of miRNA and target abundance.

Authors:  Rémy Denzler; Vikram Agarwal; Joanna Stefano; David P Bartel; Markus Stoffel
Journal:  Mol Cell       Date:  2014-05-01       Impact factor: 17.970

4.  Detecting and characterizing circular RNAs.

Authors:  William R Jeck; Norman E Sharpless
Journal:  Nat Biotechnol       Date:  2014-05       Impact factor: 54.908

5.  A circular RNA protects the heart from pathological hypertrophy and heart failure by targeting miR-223.

Authors:  Kun Wang; Bo Long; Fang Liu; Jian-Xun Wang; Cui-Yun Liu; Bing Zhao; Lu-Yu Zhou; Teng Sun; Man Wang; Tao Yu; Ying Gong; Jia Liu; Yan-Han Dong; Na Li; Pei-Feng Li
Journal:  Eur Heart J       Date:  2016-01-21       Impact factor: 29.983

6.  Circular RNA profiling reveals an abundant circHIPK3 that regulates cell growth by sponging multiple miRNAs.

Authors:  Qiupeng Zheng; Chunyang Bao; Weijie Guo; Shuyi Li; Jie Chen; Bing Chen; Yanting Luo; Dongbin Lyu; Yan Li; Guohai Shi; Linhui Liang; Jianren Gu; Xianghuo He; Shenglin Huang
Journal:  Nat Commun       Date:  2016-04-06       Impact factor: 14.919

7.  Impact of MicroRNA Levels, Target-Site Complementarity, and Cooperativity on Competing Endogenous RNA-Regulated Gene Expression.

Authors:  Rémy Denzler; Sean E McGeary; Alexandra C Title; Vikram Agarwal; David P Bartel; Markus Stoffel
Journal:  Mol Cell       Date:  2016-10-27       Impact factor: 17.970

Review 8.  Circular RNAs: Biogenesis, Function and Role in Human Diseases.

Authors:  John Greene; Anne-Marie Baird; Lauren Brady; Marvin Lim; Steven G Gray; Raymond McDermott; Stephen P Finn
Journal:  Front Mol Biosci       Date:  2017-06-06

9.  Identification of senescence-associated circular RNAs (SAC-RNAs) reveals senescence suppressor CircPVT1.

Authors:  Amaresh C Panda; Ioannis Grammatikakis; Kyoung Mi Kim; Supriyo De; Jennifer L Martindale; Rachel Munk; Xiaoling Yang; Kotb Abdelmohsen; Myriam Gorospe
Journal:  Nucleic Acids Res       Date:  2017-04-20       Impact factor: 16.971

10.  Circular RNA (circRNA) in Alzheimer's disease (AD).

Authors:  Walter J Lukiw
Journal:  Front Genet       Date:  2013-12-31       Impact factor: 4.599

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  26 in total

1.  Biomarker potentials of miRNA-associated circRNAs in breast cancer (MCF-7) cells: an in vitro and in silico study.

Authors:  Sema Misir; Ceylan Hepokur; Yuksel Aliyazicioglu; Francisco J Enguita
Journal:  Mol Biol Rep       Date:  2021-03-28       Impact factor: 2.316

2.  Circular RNA circ_0008934 promotes hepatocellular carcinoma growth and metastasis through modulating miR-1305/TMTC3 axis.

Authors:  Jia-Xi Li; Jin-Jiang Wang; Zhou-Feng Deng; Hao Zheng; Chun-Mei Yang; Ying Yuan; Cheng Yang; Fang-Fang Gu; Wei-Qi Wu; Guang-Lei Qiao; Li-Jun Ma
Journal:  Hum Cell       Date:  2022-01-11       Impact factor: 4.174

3.  Silencing hsa_circRNA_0008035 exerted repressive function on osteosarcoma cell growth and migration by upregulating microRNA-375.

Authors:  Gu Gong; Zhifeng Han; Wenjun Wang; Qinli Xu; Jingzhe Zhang
Journal:  Cell Cycle       Date:  2020-08-11       Impact factor: 4.534

Review 4.  The design and synthesis of circular RNAs.

Authors:  Prisca Obi; Y Grace Chen
Journal:  Methods       Date:  2021-03-02       Impact factor: 3.608

Review 5.  Research progress of circRNA as a biomarker of sepsis: a narrative review.

Authors:  Lei Qi; Yan Yan; Bairong Chen; Jiling Cao; Guiwen Liang; Pan Xu; Yue Wang; Yuting Ren; Guomin Mao; Zhongwei Huang; Cheng Xu; Haiyan Jiang
Journal:  Ann Transl Med       Date:  2021-04

6.  Thymic transcriptome analysis after Newcastle disease virus inoculation in chickens and the influence of host small RNAs on NDV replication.

Authors:  Liangxing Guo; Zhaokun Mu; Furong Nie; Xuanniu Chang; Haitao Duan; Haoyan Li; Jingfeng Zhang; Jia Zhou; Yudan Ji; Mengyun Li
Journal:  Sci Rep       Date:  2021-05-13       Impact factor: 4.379

7.  Multiple Omics Integration Reveals Key Circular RNAs in Hepatocellular Carcinoma.

Authors:  Zi-Li Huang; Xiu-Yan Huang; Jin Huang; Xin-Yu Huang; Yong-Hua Xu; Jian Zhou; Zhao-You Tang
Journal:  Front Oncol       Date:  2021-05-18       Impact factor: 6.244

Review 8.  Circular RNA as an Additional Player in the Conflicts Between the Host and the Virus.

Authors:  Aditi Choudhary; Pratibha Madbhagat; M Sreepadmanabh; Vipin Bhardwaj; Ajit Chande
Journal:  Front Immunol       Date:  2021-05-28       Impact factor: 7.561

9.  CircELK4 Contributes to Lupus Nephritis by Acting as a miR-27b-3p Sponge to Regulate STING/IRF3/IFN-I Signaling.

Authors:  Zhi-Quan Xu; Yan Ding; Xiao-Yan Huang; Wei Xiang; Xiao-Jie He
Journal:  Inflammation       Date:  2021-06-05       Impact factor: 4.092

Review 10.  Hints From the Cellular Functions to the Practical Outlook of Circular RNAs.

Authors:  Liora Yesharim; Marzieh Mojbafan; Maryam Abiri
Journal:  Front Genet       Date:  2021-06-17       Impact factor: 4.599

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