Literature DB >> 30151973

A Structural Basis for 129 Xe Hyper-CEST Signal in TEM-1 β-Lactamase.

Benjamin W Roose1, Serge D Zemerov1, Yanfei Wang2, Marina A Kasimova3, Vincenzo Carnevale4, Ivan J Dmochowski1.   

Abstract

Genetically encoded (GE) contrast agents detectable by magnetic resonance imaging (MRI) enable non-invasive visualization of gene expression and cell proliferation at virtually unlimited penetration depths. Using hyperpolarized 129 Xe in combination with chemical exchange saturation transfer, an MR contrast approach known as hyper-CEST, enables ultrasensitive protein detection and biomolecular imaging. GE MRI contrast agents developed to date include nanoscale proteinaceous gas vesicles as well as the monomeric bacterial proteins TEM-1 β-lactamase (bla) and maltose binding protein (MBP). To improve understanding of hyper-CEST NMR with proteins, structural and computational studies were performed to further characterize the Xe-bla interaction. X-ray crystallography validated the location of a high-occupancy Xe binding site predicted by MD simulations, and mutagenesis experiments confirmed this Xe site as the origin of the observed CEST contrast. Structural studies and MD simulations with representative bla mutants offered additional insight regarding the relationship between local protein structure and CEST contrast.
© 2019 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  CEST; Xenon; contrast; hyperpolarized; magnetic resonance

Mesh:

Substances:

Year:  2018        PMID: 30151973      PMCID: PMC6611679          DOI: 10.1002/cphc.201800624

Source DB:  PubMed          Journal:  Chemphyschem        ISSN: 1439-4235            Impact factor:   3.102


  63 in total

1.  A new class of contrast agents for MRI based on proton chemical exchange dependent saturation transfer (CEST).

Authors:  K M Ward; A H Aletras; R S Balaban
Journal:  J Magn Reson       Date:  2000-03       Impact factor: 2.229

2.  Detection of a conformational change in maltose binding protein by (129)Xe NMR spectroscopy.

Authors:  S M Rubin; M M Spence; I E Dimitrov; E J Ruiz; A Pines; D E Wemmer
Journal:  J Am Chem Soc       Date:  2001-09-05       Impact factor: 15.419

Review 3.  Nuclear magnetic resonance of laser-polarized noble gases in molecules, materials, and organisms.

Authors:  Boyd M Goodson
Journal:  J Magn Reson       Date:  2002-04       Impact factor: 2.229

Review 4.  Advances in in vivo bioluminescence imaging of gene expression.

Authors:  Christopher H Contag; Michael H Bachmann
Journal:  Annu Rev Biomed Eng       Date:  2002-03-22       Impact factor: 9.590

5.  Quantitative imaging of cis-regulatory reporters in living embryos.

Authors:  Ivan J Dmochowski; Jane E Dmochowski; Paola Oliveri; Eric H Davidson; Scott E Fraser
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-17       Impact factor: 11.205

6.  Xenon and halogenated alkanes track putative substrate binding cavities in the soluble methane monooxygenase hydroxylase.

Authors:  D A Whittington; A C Rosenzweig; C A Frederick; S J Lippard
Journal:  Biochemistry       Date:  2001-03-27       Impact factor: 3.162

7.  Characterization of the effects of nonspecific xenon-protein interactions on (129)Xe chemical shifts in aqueous solution: further development of xenon as a biomolecular probe.

Authors:  S M Rubin; M M Spence; A Pines; D E Wemmer
Journal:  J Magn Reson       Date:  2001-09       Impact factor: 2.229

8.  Probing proteins in solution by (129)Xe NMR spectroscopy.

Authors:  E Locci; Y Dehouck; M Casu; G Saba; A Lai; M Luhmer; J Reisse; K Bartik
Journal:  J Magn Reson       Date:  2001-06       Impact factor: 2.229

9.  Mapping the pathways for O2 entry into and exit from myoglobin.

Authors:  E E Scott; Q H Gibson; J S Olson
Journal:  J Biol Chem       Date:  2000-10-03       Impact factor: 5.157

10.  Detection and characterization of xenon-binding sites in proteins by 129Xe NMR spectroscopy.

Authors:  Seth M Rubin; Seok-Yong Lee; E Janette Ruiz; Alexander Pines; David E Wemmer
Journal:  J Mol Biol       Date:  2002-09-13       Impact factor: 5.469

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  5 in total

Review 1.  Molecular Sensing with Host Systems for Hyperpolarized 129Xe.

Authors:  Jabadurai Jayapaul; Leif Schröder
Journal:  Molecules       Date:  2020-10-11       Impact factor: 4.411

2.  Detecting protein-protein interactions by Xe-129 NMR.

Authors:  Zhuangyu Zhao; Benjamin W Roose; Serge D Zemerov; Madison A Stringer; Ivan J Dmochowski
Journal:  Chem Commun (Camb)       Date:  2020-09-22       Impact factor: 6.222

3.  129Xe NMR-Protein Sensor Reveals Cellular Ribose Concentration.

Authors:  Serge D Zemerov; Benjamin W Roose; Kelsey L Farenhem; Zhuangyu Zhao; Madison A Stringer; Aaron R Goldman; David W Speicher; Ivan J Dmochowski
Journal:  Anal Chem       Date:  2020-09-23       Impact factor: 6.986

Review 4.  Nanoparticle-Based Contrast Agents for 129Xe HyperCEST NMR and MRI Applications.

Authors:  Jabadurai Jayapaul; Leif Schröder
Journal:  Contrast Media Mol Imaging       Date:  2019-11-22       Impact factor: 3.161

5.  Cryptophane-xenon complexes for 129Xe MRI applications.

Authors:  Serge D Zemerov; Ivan J Dmochowski
Journal:  RSC Adv       Date:  2021-02-17       Impact factor: 3.361

  5 in total

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