Literature DB >> 11531366

Characterization of the effects of nonspecific xenon-protein interactions on (129)Xe chemical shifts in aqueous solution: further development of xenon as a biomolecular probe.

S M Rubin1, M M Spence, A Pines, D E Wemmer.   

Abstract

The sensitivity of (129)Xe chemical shifts to weak nonspecific xenon-protein interactions has suggested the use of xenon to probe biomolecular structure and interactions. The realization of this potential necessitates a further understanding of how different macromolecular properties influence the (129)Xe chemical shift in aqueous solution. Toward this goal, we have acquired (129)Xe NMR spectra of xenon dissolved in amino acid, peptide, and protein solutions under both native and denaturing conditions. In general, these cosolutes induce (129)Xe chemical shifts that are downfield relative to the shift in water, as they deshield the xenon nucleus through weak, diffusion-mediated interactions. Correlations between the extent of deshielding and molecular properties including chemical identity, structure, and charge are reported. Xenon deshielding was found to depend linearly on protein size under denaturing solution conditions; the denaturant itself has a characteristic effect on the (129)Xe chemical shift that likely results from a change in the xenon solvation shell structure. In native protein solutions, contributions to the overall (129)Xe chemical shift arise from the presence of weak xenon binding either in cavities or at the protein surface. Potential applications of xenon as a probe of biological systems including the detection of conformational changes and the possible quantification of buried surface area at protein-protein interfaces are discussed. Copyright 2001 Academic Press.

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Year:  2001        PMID: 11531366     DOI: 10.1006/jmre.2001.2389

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  10 in total

1.  Distinguishing multiple chemotaxis Y protein conformations with laser-polarized 129Xe NMR.

Authors:  Thomas J Lowery; Michaeleen Doucleff; E Janette Ruiz; Seth M Rubin; Alexander Pines; David E Wemmer
Journal:  Protein Sci       Date:  2005-03-01       Impact factor: 6.725

2.  A Genetically Encoded β-Lactamase Reporter for Ultrasensitive (129) Xe NMR in Mammalian Cells.

Authors:  Yanfei Wang; Benjamin W Roose; Eugene J Palovcak; Vincenzo Carnevale; Ivan J Dmochowski
Journal:  Angew Chem Int Ed Engl       Date:  2016-06-15       Impact factor: 15.336

3.  A Structural Basis for 129 Xe Hyper-CEST Signal in TEM-1 β-Lactamase.

Authors:  Benjamin W Roose; Serge D Zemerov; Yanfei Wang; Marina A Kasimova; Vincenzo Carnevale; Ivan J Dmochowski
Journal:  Chemphyschem       Date:  2018-09-13       Impact factor: 3.102

4.  The interaction of ammonia and xenon with the imidazole glycerol phosphate synthase from Thermotoga maritima as detected by NMR spectroscopy.

Authors:  Christoph Liebold; Felix List; Hans Robert Kalbitzer; Reinhard Sterner; Eike Brunner
Journal:  Protein Sci       Date:  2010-09       Impact factor: 6.725

5.  Nanomolar small-molecule detection using a genetically encoded 129Xe NMR contrast agent.

Authors:  B W Roose; S D Zemerov; I J Dmochowski
Journal:  Chem Sci       Date:  2017-09-20       Impact factor: 9.825

Review 6.  Nanoparticle-Based Contrast Agents for 129Xe HyperCEST NMR and MRI Applications.

Authors:  Jabadurai Jayapaul; Leif Schröder
Journal:  Contrast Media Mol Imaging       Date:  2019-11-22       Impact factor: 3.161

7.  Multidimensional mapping of spin-exchange optical pumping in clinical-scale batch-mode 129Xe hyperpolarizers.

Authors:  Panayiotis Nikolaou; Aaron M Coffey; Kaili Ranta; Laura L Walkup; Brogan M Gust; Michael J Barlow; Matthew S Rosen; Boyd M Goodson; Eduard Y Chekmenev
Journal:  J Phys Chem B       Date:  2014-04-25       Impact factor: 2.991

8.  Transverse spin relaxation and diffusion-constant measurements of spin-polarized 129Xe nuclei in the presence of a magnetic field gradient.

Authors:  Xiaohu Liu; Chang Chen; Tianliang Qu; Kaiyong Yang; Hui Luo
Journal:  Sci Rep       Date:  2016-04-06       Impact factor: 4.379

9.  Structural transitions in full-length human prion protein detected by xenon as probe and spin labeling of the N-terminal domain.

Authors:  Sunilkumar Puthenpurackal Narayanan; Divya Gopalakrishnan Nair; Daniel Schaal; Marisa Barbosa de Aguiar; Sabine Wenzel; Werner Kremer; Stephan Schwarzinger; Hans Robert Kalbitzer
Journal:  Sci Rep       Date:  2016-06-24       Impact factor: 4.379

10.  Inert Gas Deactivates Protein Activity by Aggregation.

Authors:  Lijuan Zhang; Yuebin Zhang; Jie Cheng; Lei Wang; Xingya Wang; Meng Zhang; Yi Gao; Jun Hu; Xuehua Zhang; Junhong Lü; Guohui Li; Renzhong Tai; Haiping Fang
Journal:  Sci Rep       Date:  2017-08-31       Impact factor: 4.379

  10 in total

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