Literature DB >> 12237411

Quantitative imaging of cis-regulatory reporters in living embryos.

Ivan J Dmochowski1, Jane E Dmochowski, Paola Oliveri, Eric H Davidson, Scott E Fraser.   

Abstract

A confocal laser scanning microscopy method has been developed for the quantitation of green fluorescent protein (GFP) as a reporter of gene activity in living three-dimensional structures such as sea urchin and starfish embryos. This method is between 2 and 50 times more accurate than conventional confocal microscopy procedures depending on the localization of GFP within an embryo. By using coinjected Texas red dextran as an internal fluorescent standard, the observed GFP intensity is corrected for variations in laser excitation and fluorescence collection efficiency. To relate the recorded image intensity to the number of GFP molecules, the embryos were lysed gently, and a fluorometric analysis of their contents was performed. Confocal laser scanning microscopy data collection from a single sea urchin blastula required less than 2 min, thereby allowing gene expression in dozens of embryos to be monitored in parallel with high spatial and temporal resolution.

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Keywords:  Non-programmatic

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Year:  2002        PMID: 12237411      PMCID: PMC130556          DOI: 10.1073/pnas.202483199

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  19 in total

1.  Computational adaptive optics for live three-dimensional biological imaging.

Authors:  Z Kam; B Hanser; M G Gustafsson; D A Agard; J W Sedat
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-27       Impact factor: 11.205

2.  Fluorescent proteins from nonbioluminescent Anthozoa species.

Authors:  M V Matz; A F Fradkov; Y A Labas; A P Savitsky; A G Zaraisky; M L Markelov; S A Lukyanov
Journal:  Nat Biotechnol       Date:  1999-10       Impact factor: 54.908

3.  Dynamics of the endoplasmic reticulum and golgi apparatus during early sea urchin development.

Authors:  M Terasaki
Journal:  Mol Biol Cell       Date:  2000-03       Impact factor: 4.138

Review 4.  A genomic regulatory network for development.

Authors:  Eric H Davidson; Jonathan P Rast; Paola Oliveri; Andrew Ransick; Cristina Calestani; Chiou-Hwa Yuh; Takuya Minokawa; Gabriele Amore; Veronica Hinman; Cesar Arenas-Mena; Ochan Otim; C Titus Brown; Carolina B Livi; Pei Yun Lee; Roger Revilla; Alistair G Rust; Zheng jun Pan; Maria J Schilstra; Peter J C Clarke; Maria I Arnone; Lee Rowen; R Andrew Cameron; David R McClay; Leroy Hood; Hamid Bolouri
Journal:  Science       Date:  2002-03-01       Impact factor: 47.728

5.  Laser scanning cytometry to quantify gene transfer efficiency and transcriptional activity of EGFP constructs.

Authors:  Andreu Ferrer-Martínez; Anna Maria Gomez-Foix
Journal:  Biotechniques       Date:  2002-01       Impact factor: 1.993

6.  Mosaic incorporation and regulated expression of an exogenous gene in the sea urchin embryo.

Authors:  B R Hough-Evans; R J Britten; E H Davidson
Journal:  Dev Biol       Date:  1988-09       Impact factor: 3.582

7.  Characterization of the SpHE promoter that is spatially regulated along the animal-vegetal axis of the sea urchin embryo.

Authors:  Z Wei; L M Angerer; M L Gagnon; R C Angerer
Journal:  Dev Biol       Date:  1995-09       Impact factor: 3.582

8.  Intercellular recognition: quantitation of initial binding events.

Authors:  D R McClay; G M Wessel; R B Marchase
Journal:  Proc Natl Acad Sci U S A       Date:  1981-08       Impact factor: 11.205

9.  Protein synthesis, polyribosomes, and peptide elongation in early development of Strongylocentrotus purpuratus.

Authors:  A S Goustin; F H Wilt
Journal:  Dev Biol       Date:  1981-02       Impact factor: 3.582

10.  Differential stability of expression of similarly specified endogenous and exogenous genes in the sea urchin embryo.

Authors:  D L Livant; B R Hough-Evans; J G Moore; R J Britten; E H Davidson
Journal:  Development       Date:  1991-10       Impact factor: 6.868

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  4 in total

1.  In situ analysis and imaging of aromatic amidine at varying ligand densities in solid phase.

Authors:  Christian J Ortiz-Hernandez; Adriana N Santiago-Ruiz; Adaliz J Torres-Rosado; Jomarie Jiménez-Gonzalez; Sean B Yeldell; Rolando Oyola; Ivan J Dmochowski; Jose Sotero-Esteva; Vibha Bansal; Ezio Fasoli
Journal:  Anal Bioanal Chem       Date:  2019-01-24       Impact factor: 4.142

2.  A Structural Basis for 129 Xe Hyper-CEST Signal in TEM-1 β-Lactamase.

Authors:  Benjamin W Roose; Serge D Zemerov; Yanfei Wang; Marina A Kasimova; Vincenzo Carnevale; Ivan J Dmochowski
Journal:  Chemphyschem       Date:  2018-09-13       Impact factor: 3.102

3.  Imaging macromolecular interactions at an interface.

Authors:  Joshua W Lampe; Zhengzheng Liao; Ivan J Dmochowski; Portonovo S Ayyaswamy; David M Eckmann
Journal:  Langmuir       Date:  2010-02-16       Impact factor: 3.882

4.  Bioelectric regulation of innate immune system function in regenerating and intact Xenopus laevis.

Authors:  Jean-François Paré; Christopher J Martyniuk; Michael Levin
Journal:  NPJ Regen Med       Date:  2017-05-26
  4 in total

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