| Literature DB >> 30142224 |
Daniel Beltrán-Alcrudo1, Esther A Kukielka2, Nienke de Groot3, Klaas Dietze4, Mikheil Sokhadze5,6, Beatriz Martínez-López2.
Abstract
BACKGROUND: Georgia is a country in the Caucasus region with a traditional backyard and highly variable pig farming system. The practices of such sectors have seldom been described and analyzed to better understand their implication in the introduction and spread of infectious pig diseases. Moreover, the Georgian pig sector was badly hit by an epidemic of African swine fever in 2007 that quickly spread throughout the region.Entities:
Mesh:
Year: 2018 PMID: 30142224 PMCID: PMC6108502 DOI: 10.1371/journal.pone.0202800
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Map of Georgia showing study areas, African swine fever outbreaks and swine density.
Study areas are delimited by a blue line; Politically disputed regions are depicted in light green.
Summary of questionnaires’ implementation in pig farmers and butchers in four regions of Georgia, in 2012.
| Region | Municipalities selected | Villages | Interviewers’ trainings | End of interviews | Vets hired | Interviewed farmers/ butchers/total |
|---|---|---|---|---|---|---|
| Sagarejo, Gurjaani, Telavi, Signagi, Akhmeta, Dedoflistskaro, Kvareli and Lagodekhi | 42 | 20.09.2012 | 27.10.2012 | 8 | 120 / 30 / 150 | |
| Martvili, Zugdidi, Senaki, Khobi, Abasha, Chkhorotsku, Tsalenjikha and Mestia | 47 | 28.09.2012 | 30.10.2012 | 9 | 122 / 31 / 153 | |
| Aspindza, Adigeni, Ninotsminda, Akhalkalaki, Akhaltsikhe and Borjomi | 37 | 26.09.2012 | 06.11.2012 | 6 | 125 / 25 / 150 | |
| Gori, Kareli, Khashuri and Kaspi | 43 | 21.09.2012 | 06.10.2012 | 4 | 120 / 30 / 150 | |
| 25 | 168 | 27 | 487 / 116 / 603 |
Fig 2Pig production seasonality graphs in four regions Georgia: A) Proportion of pig scavenging by region per month by region (%); B) Proportion of pig transactions per month (%).
Fig 3Distribution of reported African swine fever compatible outbreaks in four regions in Georgia by year/region (A) and by month (B); 2012 data are not presented, since questionnaires were conducted in September-October 2012.
Fig 4Seasonality of home-slaughtering and pigs sold by butchers in four regions in Georgia (%).
Variables (names and meanings) included in two FAMDs computed from data collected on questionnaires implemented to pig farmers and butchers in four regions of Georgia, in 2012.
| Region | Region where the farm is located | QL |
| Enclosed | Enclosed housing system used during the whole year (yes/no) | QL |
| Inedible_dogs | Feeding the inedible parts of the pigs to the dogs (yes/no) | QL |
| Inedible_pit | Disposing the inedible parts of the pigs into a pit in the village (yes/no) | QL |
| ASFyn | Having suffered suspected or confirmed ASF outbreaks in the past (yes/no) | QL |
| vAny | Vaccinating pigs against any disease (yes/no) | QL |
| External_boar | Allowing sows to mate with boars from other farms while scavenging outside the farmer’s premises (yes/no) | QL |
| Qua7 | Quarantine length of more than 7 days was done last time new pigs were introduced in the farm (yes/no) | QL |
| Qua14 | Quarantine length of more than 14 days was done last time new pigs were introduced in the farm (yes/no) | QL |
| Report_CullSick | Believing that if they report a suspected ASF, sick pigs will be culled (yes/no) | QL |
| Report_CullAll | Believing that if they report a suspected ASF, all pigs in the village will be culled (yes/no) | QL |
| Income | Percentage of household income originated from pig rearing | QT |
| Consumer_House | Percentage of home-slaughtered pig products destined for home consumption | QT |
| Consumer_Friends | Percentage of home-slaughtered pig products offered to friends, relatives or neighbours | QT |
| Npigs | Number of pigs in the farm | QT |
| Altitude | Altitude of the farm | QT |
| Grain | Percentage of feed coming from grain or maize | QT |
| processed | Buying processed pig products or not (yes/no) | QL |
| p_syst | Predominant (>50%) system of purchased pigs. It could be: bakyard farms (bf), live animal markets (lam), middle men (mm), or sparse (mix, <50% in all categories) | QL |
| sf_orig | Predominant (>50%) size of the farm of origin. It could be: 0 sows (no_sows), 1–5 sows (small_org), >5 sows (medium_org), or <50% in all categories (sparse_org) | QL |
| dist_orig | Location of the farm of origin, categorised according to the predominant (more than 50%) origin. Categories: same village (s_vig), same municipality (s_mun), another municipality or region (a_munreg), sparse_dist (mix, <50% in all categories) | QL |
| sell_RH | Selling their pork to restaurants and hotels (yes/no) | QL |
| custom_orig | Origin of the customers, categorised according to the predominant (>50%) origin, i.e. same village (cs_vig), same municipality (cs_mun), another municipality or region (ca_munreg), or <50% in all categories (sparse_custom) | QL |
| livepiglets.b | Buying live piglets (yes/no) | QL |
| localB | Buying 100% local breeds (yes/no) | QL |
| SLinButcher | Whether they slaughter the pigs in their butcher premises or not | QL |
| livepigs | Number of live pigs bought | QT |
| livepiglets | Number of live piglets bought | QT |
| daysBFRsl | Days the pigs are kept alive before slaughter | QT |
| shareP | Share of pork in their overall business compared to other meats in terms of quantity (%) | QT |
| enclosed | Percentage of pigs bought from a production system where pigs were enclosed all year around | QT |
QL: qualitative; QT: quantitative
Fig 5Map of individuals (farmers) and related clusters chosen during a hierarchical clustering on principal components based on the gain in within-inertia.
Each round dot represents a farmer. Clusters were formed according to the similarities in answers in the collected variables of the questionnaire; thus, the closer the dots are, the more similar the answers of those farmers were. Each square dot represents the centroid of each specific cluster.
Fig 6Contribution of the variable Region to the first two dimensions of the farmers’ FAMD.
Dimension one explains 15.68% of the variability, whereas dimension two explains 12.33%. Each round dot represents a butcher. The closer the dots are, the more similar the answers of those farmers were. This figure indicates that butchers living within the same region (coloured) had similar answers to the questionnaire.
Fig 7Distribution of ASF occurrence in the individual plot of the farmers’ FAMD.
Each round dot represents a farmer. The closer the dots are, the more similar the answers of those farmers were. This figure indicates that farmers that reported African swine fever outbreaks had similar answers to the questionnaire, as they are represented in the figure as being closer together.
Description of the most influencing qualitative variables in the selection of clusters of a hierarchical cluster analysis.
| Qualitative variable | Variable outcome | % of the sample in the cluster ( | % of category in cluster ( | % of category in sample ( |
|---|---|---|---|---|
| SZS | 99.2 | 95.9 | 24.2 | |
| No | 68.4 | 88.5 | 32.4 | |
| Yes | 52.9 | 75.4 | 35.7 | |
| No | 33.7 | 95.9 | 71.3 | |
| No | 45.9 | 59 | 32.2 | |
| SJ | 97.6 | 100 | 25.7 | |
| No | 31.9 | 84.4 | 66.3 | |
| Yes | 29.7 | 80.3 | 67.8 | |
| No | 27 | 95.1 | 88 | |
| SK | 72.6 | 100 | 25.5 | |
| No | 27.5 | 95.6 | 64.3 | |
| Yes | 26.5 | 96.7 | 67.6 | |
| No | 25.1 | 96.7 | 71.3 | |
| Yes | 25.8 | 94.4 | 67.8 | |
| Kakheti | 97.5 | 99.2 | 24.6 | |
| No | 38.4 | 70.3 | 44.4 | |
| Yes | 32.2 | 89.8 | 67.6 | |
| Yes | 42.14 | 53.2 | 28.8 | |
| Yes | 58.6 | 97.1 | 11.9 | |
| Yes | 34.8 | 91.4 | 18.9 | |
| Yes | 29.6 | 97.1 | 23.6 | |
| SK | 25 | 88.6 | 25.5 | |
| Yes | 18.9 | 88.6 | 33.7 |
1. Percentage of the sample in the cluster = % of individuals with the variable outcome in the study population who are in the cluster.
2. Percentage of category in cluster = % of individuals in the cluster with the variable outcome.
3. Percentage of category in sample = % of the variable in the study population.
Fig 8Map of individuals (butchers) and related clusters chosen during a hierarchical clustering on principal components based on the gain in within-inertia.
Each round dot represents a butcher. Clusters were formed according to the similarities in answers in the collected variables of the questionnaire; thus, the closer the dots are, the more similar the answers of those butchers were. Each square dot represents the centroid of each specific cluster.
Description of the most influencing qualitative variables in the selection of clusters of a hierarchical cluster analysis.
| Variable | Variable outcome | % of the sample in the cluster ( | % of category in cluster ( | % of category in sample ( |
|---|---|---|---|---|
| CLUSTER 1 | ||||
| Region | SZS | 93.5 | 100 | 26.7 |
| Size farm origin | Small (1–5) | 49.1 | 93.1 | 47.4 |
| Local breed | Yes | 38.8 | 89.7 | 57.8 |
| Origin customer | Another municipality/region | 100 | 17.24 | 4.31 |
| CLUSTER 2 | ||||
| Region | SJ | 100 | 10.3 | 21.5 |
| Buy live piglets | No | 64.2 | 98.4 | 81.9 |
| Region | Kakheti | 90 | 43.5 | 25.9 |
| Origin customer | Same village | 69.1 | 75.8 | 58.6 |
| CLUSTER 3 | ||||
| Buy live piglets | Yes | 85.7 | 72 | 18.1 |
| Region | SK | 70 | 84 | 25.9 |
| Origin customer | Sparse | 59.3 | 64 | 23.2 |
| Local breed | No | 42.9 | 84 | 42.2 |
| Size farm origin | Medium (>5) | 72.7 | 32 | 9.5 |
1. Percentage of the sample in the cluster = % of individuals with the variable outcome in the study population who are in the cluster;
2. Percentage of category in cluster = % of individuals in the cluster with the variable outcome;
3. Percentage of category in sample = % of the variable in the study population.