Literature DB >> 30010802

Whole Blood Gene Expression Associated With Clinical Biological Age.

Honghuang Lin1,2, Kathryn L Lunetta1,3, Qiang Zhao3, Pooja R Mandaviya4, Jian Rong1,3, Emelia J Benjamin1,5,6, Roby Joehanes7, Daniel Levy1,8, Joyce B J van Meurs4, Martin G Larson1,3, Joanne M Murabito1,9.   

Abstract

Background: Biologic age may better reflect an individual's rate of aging than chronologic age.
Methods: We conducted a transcriptome-wide association study with biologic age estimated with clinical biomarkers, which included: systolic blood pressure, forced expiratory volume at 1 second (FEV1), total cholesterol, fasting glucose, C-reactive protein, and serum creatinine. We assessed the association between the difference between biologic age and chronologic age (∆age) and gene expression in whole blood measured using the Affymetrix Human Exon 1.0st Array.
Results: Our discovery sample included 2,163 participants from the Framingham Offspring cohort (mean age 67 ± 9 years, 55% women). A total of 481 genes were significantly associated with ∆age (p < 2.8 × 10-6). Among them, 415 genes were validated (p < .05/481 = 1.0 × 10-4) in 2,946 participants from the Framingham Third Generation cohort (mean age 46 ± 9 years, 53% women). Many of the significant genes were involved in the ubiquitin-mediated proteolysis pathway. The replication in 414 Rotterdam Study participants (mean age 59 ± 8, 52% women) found 104 of 415 validated genes reached nominal significance (p < .05).
Conclusion: We identified and validated 415 genes associated with ∆age in a community-based cohort. Future functional characterization of the biologic age-related gene network may identify targets to test for interventions to delay aging in older adults.

Entities:  

Mesh:

Substances:

Year:  2019        PMID: 30010802      PMCID: PMC6298179          DOI: 10.1093/gerona/gly164

Source DB:  PubMed          Journal:  J Gerontol A Biol Sci Med Sci        ISSN: 1079-5006            Impact factor:   6.053


  40 in total

1.  Exploration, normalization, and summaries of high density oligonucleotide array probe level data.

Authors:  Rafael A Irizarry; Bridget Hobbs; Francois Collin; Yasmin D Beazer-Barclay; Kristen J Antonellis; Uwe Scherf; Terence P Speed
Journal:  Biostatistics       Date:  2003-04       Impact factor: 5.899

Review 2.  Physical Resilience in Older Adults: Systematic Review and Development of an Emerging Construct.

Authors:  Heather E Whitson; Wei Duan-Porter; Kenneth E Schmader; Miriam C Morey; Harvey J Cohen; Cathleen S Colón-Emeric
Journal:  J Gerontol A Biol Sci Med Sci       Date:  2015-12-29       Impact factor: 6.053

3.  A new approach to the concept and computation of biological age.

Authors:  Petr Klemera; Stanislav Doubal
Journal:  Mech Ageing Dev       Date:  2005-11-28       Impact factor: 5.432

4.  High density DNA methylation array with single CpG site resolution.

Authors:  Marina Bibikova; Bret Barnes; Chan Tsan; Vincent Ho; Brandy Klotzle; Jennie M Le; David Delano; Lu Zhang; Gary P Schroth; Kevin L Gunderson; Jian-Bing Fan; Richard Shen
Journal:  Genomics       Date:  2011-08-02       Impact factor: 5.736

5.  Geroscience: linking aging to chronic disease.

Authors:  Brian K Kennedy; Shelley L Berger; Anne Brunet; Judith Campisi; Ana Maria Cuervo; Elissa S Epel; Claudio Franceschi; Gordon J Lithgow; Richard I Morimoto; Jeffrey E Pessin; Thomas A Rando; Arlan Richardson; Eric E Schadt; Tony Wyss-Coray; Felipe Sierra
Journal:  Cell       Date:  2014-11-06       Impact factor: 41.582

6.  Quantification of biological aging in young adults.

Authors:  Daniel W Belsky; Avshalom Caspi; Renate Houts; Harvey J Cohen; David L Corcoran; Andrea Danese; HonaLee Harrington; Salomon Israel; Morgan E Levine; Jonathan D Schaefer; Karen Sugden; Ben Williams; Anatoli I Yashin; Richie Poulton; Terrie E Moffitt
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-06       Impact factor: 11.205

7.  DCAF4, a novel gene associated with leucocyte telomere length.

Authors:  Massimo Mangino; Lene Christiansen; Rivka Stone; Steven C Hunt; Kent Horvath; Dan T A Eisenberg; Masayuki Kimura; Inge Petersen; Jeremy D Kark; Utz Herbig; Alex P Reiner; Athanase Benetos; Veryan Codd; Dale R Nyholt; Ronit Sinnreich; Kaare Christensen; Hisham Nassar; Shih-Jen Hwang; Daniel Levy; Veronique Bataille; Annette L Fitzpatrick; Wei Chen; Gerald S Berenson; Nilesh J Samani; Nicholas G Martin; Sarah Tishkoff; Nicholas J Schork; Kirsten Ohm Kyvik; Christine Dalgård; Timothy D Spector; Abraham Aviv
Journal:  J Med Genet       Date:  2015-01-26       Impact factor: 6.318

8.  Integrated genome-wide analysis of expression quantitative trait loci aids interpretation of genomic association studies.

Authors:  Roby Joehanes; Xiaoling Zhang; Tianxiao Huan; Chen Yao; Sai-Xia Ying; Quang Tri Nguyen; Cumhur Yusuf Demirkale; Michael L Feolo; Nataliya R Sharopova; Anne Sturcke; Alejandro A Schäffer; Nancy Heard-Costa; Han Chen; Po-Ching Liu; Richard Wang; Kimberly A Woodhouse; Kahraman Tanriverdi; Jane E Freedman; Nalini Raghavachari; Josée Dupuis; Andrew D Johnson; Christopher J O'Donnell; Daniel Levy; Peter J Munson
Journal:  Genome Biol       Date:  2017-01-25       Impact factor: 13.583

9.  WEB-based GEne SeT AnaLysis Toolkit (WebGestalt): update 2013.

Authors:  Jing Wang; Dexter Duncan; Zhiao Shi; Bing Zhang
Journal:  Nucleic Acids Res       Date:  2013-05-23       Impact factor: 16.971

10.  HIV relies on neddylation for ubiquitin ligase-mediated functions.

Authors:  Michael D Nekorchuk; Hamayun J Sharifi; Andrea K M Furuya; Robert Jellinger; Carlos M C de Noronha
Journal:  Retrovirology       Date:  2013-11-18       Impact factor: 4.602

View more
  11 in total

1.  Klotho Gene in Human Salt-Sensitive Hypertension.

Authors:  Lorena Citterio; Simona Delli Carpini; Sara Lupoli; Elena Brioni; Marco Simonini; Simone Fontana; Laura Zagato; Elisabetta Messaggio; Cristina Barlassina; Daniele Cusi; Paolo Manunta; Chiara Lanzani
Journal:  Clin J Am Soc Nephrol       Date:  2020-01-28       Impact factor: 8.237

2.  Multi-Omic Biological Age Estimation and Its Correlation With Wellness and Disease Phenotypes: A Longitudinal Study of 3,558 Individuals.

Authors:  John C Earls; Noa Rappaport; Laura Heath; Tomasz Wilmanski; Andrew T Magis; Nicholas J Schork; Gilbert S Omenn; Jennifer Lovejoy; Leroy Hood; Nathan D Price
Journal:  J Gerontol A Biol Sci Med Sci       Date:  2019-11-13       Impact factor: 6.053

3.  Genetic factors for short life span associated with evolution of the loss of flight ability.

Authors:  Atsushi Ikemoto; Daiki X Sato; Takashi Makino; Masakado Kawata
Journal:  Ecol Evol       Date:  2020-05-29       Impact factor: 2.912

4.  Correction for both common and rare cell types in blood is important to identify genes that correlate with age.

Authors:  Damiano Pellegrino-Coppola; Annique Claringbould; Maartje Stutvoet; Dorret I Boomsma; M Arfan Ikram; P Eline Slagboom; Harm-Jan Westra; Lude Franke
Journal:  BMC Genomics       Date:  2021-03-15       Impact factor: 3.969

5.  Low muscle strength and increased arterial stiffness go hand in hand.

Authors:  Maximilian König; Nikolaus Buchmann; Ute Seeland; Dominik Spira; Elisabeth Steinhagen-Thiessen; Ilja Demuth
Journal:  Sci Rep       Date:  2021-02-03       Impact factor: 4.379

6.  Downregulation of exhausted cytotoxic T cells in gene expression networks of multisystem inflammatory syndrome in children.

Authors:  Noam D Beckmann; Phillip H Comella; Esther Cheng; Lauren Lepow; Aviva G Beckmann; Scott R Tyler; Konstantinos Mouskas; Nicole W Simons; Gabriel E Hoffman; Nancy J Francoeur; Diane Marie Del Valle; Gurpawan Kang; Anh Do; Emily Moya; Lillian Wilkins; Jessica Le Berichel; Christie Chang; Robert Marvin; Sharlene Calorossi; Alona Lansky; Laura Walker; Nancy Yi; Alex Yu; Jonathan Chung; Matthew Hartnett; Melody Eaton; Sandra Hatem; Hajra Jamal; Alara Akyatan; Alexandra Tabachnikova; Lora E Liharska; Liam Cotter; Brian Fennessy; Akhil Vaid; Guillermo Barturen; Hardik Shah; Ying-Chih Wang; Shwetha Hara Sridhar; Juan Soto; Swaroop Bose; Kent Madrid; Ethan Ellis; Elyze Merzier; Konstantinos Vlachos; Nataly Fishman; Manying Tin; Melissa Smith; Hui Xie; Manishkumar Patel; Kai Nie; Kimberly Argueta; Jocelyn Harris; Neha Karekar; Craig Batchelor; Jose Lacunza; Mahlet Yishak; Kevin Tuballes; Ieisha Scott; Arvind Kumar; Suraj Jaladanki; Charuta Agashe; Ryan Thompson; Evan Clark; Bojan Losic; Lauren Peters; Panagiotis Roussos; Jun Zhu; Wenhui Wang; Andrew Kasarskis; Benjamin S Glicksberg; Girish Nadkarni; Dusan Bogunovic; Cordelia Elaiho; Sandeep Gangadharan; George Ofori-Amanfo; Kasey Alesso-Carra; Kenan Onel; Karen M Wilson; Carmen Argmann; Supinda Bunyavanich; Marta E Alarcón-Riquelme; Thomas U Marron; Adeeb Rahman; Seunghee Kim-Schulze; Sacha Gnjatic; Bruce D Gelb; Miriam Merad; Robert Sebra; Eric E Schadt; Alexander W Charney
Journal:  Nat Commun       Date:  2021-08-11       Impact factor: 17.694

Review 7.  A Model of Evolutionary Selection: The Cardiovascular Protective Function of the Longevity Associated Variant of BPIFB4.

Authors:  Francesco Villa; Albino Carrizzo; Anna Ferrario; Anna Maciag; Monica Cattaneo; Chiara Carmela Spinelli; Francesco Montella; Antonio Damato; Elena Ciaglia; Annibale Alessandro Puca
Journal:  Int J Mol Sci       Date:  2018-10-19       Impact factor: 5.923

8.  Allele-Specific Transcript Abundance: A Pilot Study in Healthy Centenarians.

Authors:  Lauren C Tindale; Nina Thiessen; Stephen Leach; Angela R Brooks-Wilson
Journal:  J Gerontol A Biol Sci Med Sci       Date:  2020-05-22       Impact factor: 6.053

Review 9.  Utilization of Host and Microbiome Features in Determination of Biological Aging.

Authors:  Karina Ratiner; Suhaib K Abdeen; Kim Goldenberg; Eran Elinav
Journal:  Microorganisms       Date:  2022-03-21

10.  The effects of aging on molecular modulators of human embryo implantation.

Authors:  Panagiotis Ntostis; Grace Swanson; Georgia Kokkali; David Iles; John Huntriss; Agni Pantou; Maria Tzetis; Konstantinos Pantos; Helen M Picton; Stephen A Krawetz; David Miller
Journal:  iScience       Date:  2021-06-19
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.