Literature DB >> 29969410

Joint Optic Disc and Cup Segmentation Based on Multi-Label Deep Network and Polar Transformation.

Huazhu Fu, Jun Cheng, Yanwu Xu, Damon Wing Kee Wong, Jiang Liu, Xiaochun Cao.   

Abstract

Glaucoma is a chronic eye disease that leads to irreversible vision loss. The cup to disc ratio (CDR) plays an important role in the screening and diagnosis of glaucoma. Thus, the accurate and automatic segmentation of optic disc (OD) and optic cup (OC) from fundus images is a fundamental task. Most existing methods segment them separately, and rely on hand-crafted visual feature from fundus images. In this paper, we propose a deep learning architecture, named M-Net, which solves the OD and OC segmentation jointly in a one-stage multi-label system. The proposed M-Net mainly consists of multi-scale input layer, U-shape convolutional network, side-output layer, and multi-label loss function. The multi-scale input layer constructs an image pyramid to achieve multiple level receptive field sizes. The U-shape convolutional network is employed as the main body network structure to learn the rich hierarchical representation, while the side-output layer acts as an early classifier that produces a companion local prediction map for different scale layers. Finally, a multi-label loss function is proposed to generate the final segmentation map. For improving the segmentation performance further, we also introduce the polar transformation, which provides the representation of the original image in the polar coordinate system. The experiments show that our M-Net system achieves state-of-the-art OD and OC segmentation result on ORIGA data set. Simultaneously, the proposed method also obtains the satisfactory glaucoma screening performances with calculated CDR value on both ORIGA and SCES datasets.

Entities:  

Mesh:

Year:  2018        PMID: 29969410     DOI: 10.1109/TMI.2018.2791488

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  53 in total

1.  Mixed Maximum Loss Design for Optic Disc and Optic Cup Segmentation with Deep Learning from Imbalanced Samples.

Authors:  Yong-Li Xu; Shuai Lu; Han-Xiong Li; Rui-Rui Li
Journal:  Sensors (Basel)       Date:  2019-10-11       Impact factor: 3.576

2.  Microaneurysms segmentation with a U-Net based on recurrent residual convolutional neural network.

Authors:  Caixia Kou; Wei Li; Wei Liang; Zekuan Yu; Jianchen Hao
Journal:  J Med Imaging (Bellingham)       Date:  2019-06-19

3.  Optic Disc and Cup Image Segmentation Utilizing Contour-Based Transformation and Sequence Labeling Networks.

Authors:  Zhe Xie; Tonghui Ling; Yuanyuan Yang; Rong Shu; Brent J Liu
Journal:  J Med Syst       Date:  2020-03-20       Impact factor: 4.460

4.  Multi-Organ Segmentation Over Partially Labeled Datasets With Multi-Scale Feature Abstraction.

Authors:  Xi Fang; Pingkun Yan
Journal:  IEEE Trans Med Imaging       Date:  2020-10-28       Impact factor: 10.048

5.  Retinal vessel segmentation using dense U-net with multiscale inputs.

Authors:  Kejuan Yue; Beiji Zou; Zailiang Chen; Qing Liu
Journal:  J Med Imaging (Bellingham)       Date:  2019-09-27

6.  Predicting lung nodule malignancies by combining deep convolutional neural network and handcrafted features.

Authors:  Shulong Li; Panpan Xu; Bin Li; Liyuan Chen; Zhiguo Zhou; Hongxia Hao; Yingying Duan; Michael Folkert; Jianhua Ma; Shiying Huang; Steve Jiang; Jing Wang
Journal:  Phys Med Biol       Date:  2019-09-04       Impact factor: 3.609

7.  Attention-Guided 3D-CNN Framework for Glaucoma Detection and Structural-Functional Association Using Volumetric Images.

Authors:  Yasmeen George; Bhavna J Antony; Hiroshi Ishikawa; Gadi Wollstein; Joel S Schuman; Rahil Garnavi
Journal:  IEEE J Biomed Health Inform       Date:  2020-12-04       Impact factor: 5.772

8.  A slice classification model-facilitated 3D encoder-decoder network for segmenting organs at risk in head and neck cancer.

Authors:  Shuming Zhang; Hao Wang; Suqing Tian; Xuyang Zhang; Jiaqi Li; Runhong Lei; Mingze Gao; Chunlei Liu; Li Yang; Xinfang Bi; Linlin Zhu; Senhua Zhu; Ting Xu; Ruijie Yang
Journal:  J Radiat Res       Date:  2021-01-01       Impact factor: 2.724

9.  Open-Source Automatic Segmentation of Ocular Structures and Biomarkers of Microbial Keratitis on Slit-Lamp Photography Images Using Deep Learning.

Authors:  Jessica Loo; Matthias F Kriegel; Megan M Tuohy; Kyeong Hwan Kim; Venkatesh Prajna; Maria A Woodward; Sina Farsiu
Journal:  IEEE J Biomed Health Inform       Date:  2021-01-05       Impact factor: 5.772

10.  Segmentation of cellular patterns in confocal images of melanocytic lesions in vivo via a multiscale encoder-decoder network (MED-Net).

Authors:  Kivanc Kose; Alican Bozkurt; Christi Alessi-Fox; Melissa Gill; Caterina Longo; Giovanni Pellacani; Jennifer G Dy; Dana H Brooks; Milind Rajadhyaksha
Journal:  Med Image Anal       Date:  2020-10-07       Impact factor: 8.545

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