Literature DB >> 2991886

Translation activates the paused transcription complex and restores transcription of the trp operon leader region.

R Landick, J Carey, C Yanofsky.   

Abstract

It has been proposed that RNA polymerase pausing in the leader region of the tryptophan (trp) operon of Escherichia coli is responsible for the synchronization of transcription and translation essential to attenuation control. In this report we use an in vitro coupled transcription/translation system to study the effect of trp leader peptide synthesis on RNA polymerase pausing in the trp leader region. Wild-type and translation-defective trp leader templates of E. coli and Serratia marcescens were employed, and pause RNA synthesis and paused complex release (activation) were quantified relative to synthesis of the terminated leader transcript. It was observed that pausing in the trp leader region was prolonged when translation of the leader transcript was reduced by mutations in the leader region or by addition of the translation inhibitor kasugamycin or chloramphenicol. Experiments with S-30 extracts from a mutant strain that is inefficient in translating the tryptophan codons in the leader transcript indicated that ribosome movement to these codons also releases the paused transcription complex. These findings indicate that the paused trp leader transcription complex resumes transcription when released by ribosome movement over the leader peptide coding region. This release would facilitate the coupling of transcription and translation essential to attenuation control.

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Year:  1985        PMID: 2991886      PMCID: PMC390446          DOI: 10.1073/pnas.82.14.4663

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

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Journal:  Nucleic Acids Res       Date:  1979-11-24       Impact factor: 16.971

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Journal:  Eur J Biochem       Date:  1979-07

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Authors:  H Zalkin; C Yanofsky; C L Squires
Journal:  J Biol Chem       Date:  1974-01-25       Impact factor: 5.157

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Journal:  Proc R Soc Lond B Biol Sci       Date:  1966-03-22

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Authors:  T Platt; C Squires; C Yanofsky
Journal:  J Mol Biol       Date:  1976-05-15       Impact factor: 5.469

7.  Attenuation in the Escherichia coli tryptophan operon: role of RNA secondary structure involving the tryptophan codon region.

Authors:  D L Oxender; G Zurawski; C Yanofsky
Journal:  Proc Natl Acad Sci U S A       Date:  1979-11       Impact factor: 11.205

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Authors:  W F Doolittle; C Yanofsky
Journal:  J Bacteriol       Date:  1968-04       Impact factor: 3.490

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Authors:  G Zurawski; D Elseviers; G V Stauffer; C Yanofsky
Journal:  Proc Natl Acad Sci U S A       Date:  1978-12       Impact factor: 11.205

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Authors:  G Zurawski; C Yanofsky
Journal:  J Mol Biol       Date:  1980-09-05       Impact factor: 5.469

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  53 in total

Review 1.  Transcription attenuation: once viewed as a novel regulatory strategy.

Authors:  C Yanofsky
Journal:  J Bacteriol       Date:  2000-01       Impact factor: 3.490

2.  A transcriptional pause synchronizes translation with transcription in the tryptophanase operon leader region.

Authors:  Feng Gong; Charles Yanofsky
Journal:  J Bacteriol       Date:  2003-11       Impact factor: 3.490

3.  Kinetic analysis of tRNA-directed transcription antitermination of the Bacillus subtilis glyQS gene in vitro.

Authors:  Frank J Grundy; Tina M Henkin
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

4.  Pulling on the nascent RNA during transcription does not alter kinetics of elongation or ubiquitous pausing.

Authors:  Ravindra V Dalal; Matthew H Larson; Keir C Neuman; Jeff Gelles; Robert Landick; Steven M Block
Journal:  Mol Cell       Date:  2006-07-21       Impact factor: 17.970

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Authors:  K F Jensen; S Pedersen
Journal:  Microbiol Rev       Date:  1990-06

6.  Bacteriophage T7 RNA polymerase travels far ahead of ribosomes in vivo.

Authors:  I Iost; J Guillerez; M Dreyfus
Journal:  J Bacteriol       Date:  1992-01       Impact factor: 3.490

7.  Architecture of a transcribing-translating expressome.

Authors:  R Kohler; R A Mooney; D J Mills; R Landick; P Cramer
Journal:  Science       Date:  2017-04-14       Impact factor: 47.728

8.  Thermodynamic and kinetic modeling of transcriptional pausing.

Authors:  Vasisht R Tadigotla; Dáibhid O Maoiléidigh; Anirvan M Sengupta; Vitaly Epshtein; Richard H Ebright; Evgeny Nudler; Andrei E Ruckenstein
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-13       Impact factor: 11.205

Review 9.  RNA polymerase elongation factors.

Authors:  Jeffrey W Roberts; Smita Shankar; Joshua J Filter
Journal:  Annu Rev Microbiol       Date:  2008       Impact factor: 15.500

10.  Antisense oligonucleotide-stimulated transcriptional pausing reveals RNA exit channel specificity of RNA polymerase and mechanistic contributions of NusA and RfaH.

Authors:  Kellie E Kolb; Pyae P Hein; Robert Landick
Journal:  J Biol Chem       Date:  2013-11-25       Impact factor: 5.157

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