Literature DB >> 29870379

3-D Convolutional Encoder-Decoder Network for Low-Dose CT via Transfer Learning From a 2-D Trained Network.

Hongming Shan, Yi Zhang, Qingsong Yang, Uwe Kruger, Mannudeep K Kalra, Ling Sun, Wenxiang Cong, Ge Wang.   

Abstract

Low-dose computed tomography (LDCT) has attracted major attention in the medical imaging field, since CT-associated X-ray radiation carries health risks for patients. The reduction of the CT radiation dose, however, compromises the signal-to-noise ratio, which affects image quality and diagnostic performance. Recently, deep-learning-based algorithms have achieved promising results in LDCT denoising, especially convolutional neural network (CNN) and generative adversarial network (GAN) architectures. This paper introduces a conveying path-based convolutional encoder-decoder (CPCE) network in 2-D and 3-D configurations within the GAN framework for LDCT denoising. A novel feature of this approach is that an initial 3-D CPCE denoising model can be directly obtained by extending a trained 2-D CNN, which is then fine-tuned to incorporate 3-D spatial information from adjacent slices. Based on the transfer learning from 2-D to 3-D, the 3-D network converges faster and achieves a better denoising performance when compared with a training from scratch. By comparing the CPCE network with recently published work based on the simulated Mayo data set and the real MGH data set, we demonstrate that the 3-D CPCE denoising model has a better performance in that it suppresses image noise and preserves subtle structures.

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Mesh:

Year:  2018        PMID: 29870379      PMCID: PMC6022756          DOI: 10.1109/TMI.2018.2832217

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  22 in total

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2.  Penalized weighted least-squares approach to sinogram noise reduction and image reconstruction for low-dose X-ray computed tomography.

Authors:  Jing Wang; Tianfang Li; Hongbing Lu; Zhengrong Liang
Journal:  IEEE Trans Med Imaging       Date:  2006-10       Impact factor: 10.048

Review 3.  Computed tomography--an increasing source of radiation exposure.

Authors:  David J Brenner; Eric J Hall
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4.  Projection space denoising with bilateral filtering and CT noise modeling for dose reduction in CT.

Authors:  Armando Manduca; Lifeng Yu; Joshua D Trzasko; Natalia Khaylova; James M Kofler; Cynthia M McCollough; Joel G Fletcher
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5.  Low-dose CT via convolutional neural network.

Authors:  Hu Chen; Yi Zhang; Weihua Zhang; Peixi Liao; Ke Li; Jiliu Zhou; Ge Wang
Journal:  Biomed Opt Express       Date:  2017-01-09       Impact factor: 3.732

6.  Deep Convolutional Neural Network for Inverse Problems in Imaging.

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Journal:  IEEE Trans Image Process       Date:  2017-06-15       Impact factor: 10.856

7.  Block matching 3D random noise filtering for absorption optical projection tomography.

Authors:  P Fumene Feruglio; C Vinegoni; J Gros; A Sbarbati; R Weissleder
Journal:  Phys Med Biol       Date:  2010-08-25       Impact factor: 3.609

8.  Low-Dose CT Image Denoising Using a Generative Adversarial Network With Wasserstein Distance and Perceptual Loss.

Authors:  Qingsong Yang; Pingkun Yan; Yanbo Zhang; Hengyong Yu; Yongyi Shi; Xuanqin Mou; Mannudeep K Kalra; Yi Zhang; Ling Sun; Ge Wang
Journal:  IEEE Trans Med Imaging       Date:  2018-06       Impact factor: 10.048

9.  Low-dose X-ray CT reconstruction via dictionary learning.

Authors:  Qiong Xu; Hengyong Yu; Xuanqin Mou; Lei Zhang; Jiang Hsieh; Ge Wang
Journal:  IEEE Trans Med Imaging       Date:  2012-04-20       Impact factor: 10.048

10.  Generative Adversarial Networks for Noise Reduction in Low-Dose CT.

Authors:  Jelmer M Wolterink; Tim Leiner; Max A Viergever; Ivana Isgum
Journal:  IEEE Trans Med Imaging       Date:  2017-05-26       Impact factor: 10.048

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  27 in total

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Authors:  Qikui Zhu; Bo Du; Pingkun Yan
Journal:  IEEE Trans Med Imaging       Date:  2019-08-13       Impact factor: 10.048

2.  Learning to Reconstruct Computed Tomography Images Directly From Sinogram Data Under A Variety of Data Acquisition Conditions.

Authors:  Yinsheng Li; Ke Li; Chengzhu Zhang; Juan Montoya; Guang-Hong Chen
Journal:  IEEE Trans Med Imaging       Date:  2019-04-11       Impact factor: 10.048

3.  DeepPET: A deep encoder-decoder network for directly solving the PET image reconstruction inverse problem.

Authors:  Ida Häggström; C Ross Schmidtlein; Gabriele Campanella; Thomas J Fuchs
Journal:  Med Image Anal       Date:  2019-03-30       Impact factor: 8.545

4.  Multi-Contrast Super-Resolution MRI Through a Progressive Network.

Authors:  Qing Lyu; Hongming Shan; Cole Steber; Corbin Helis; Chris Whitlow; Michael Chan; Ge Wang
Journal:  IEEE Trans Med Imaging       Date:  2020-02-18       Impact factor: 10.048

5.  Quadratic Autoencoder (Q-AE) for Low-Dose CT Denoising.

Authors:  Fenglei Fan; Hongming Shan; Mannudeep K Kalra; Ramandeep Singh; Guhan Qian; Matthew Getzin; Yueyang Teng; Juergen Hahn; Ge Wang
Journal:  IEEE Trans Med Imaging       Date:  2019-12-31       Impact factor: 10.048

6.  LoDoPaB-CT, a benchmark dataset for low-dose computed tomography reconstruction.

Authors:  Johannes Leuschner; Maximilian Schmidt; Daniel Otero Baguer; Peter Maass
Journal:  Sci Data       Date:  2021-04-16       Impact factor: 6.444

7.  A review on Deep Learning approaches for low-dose Computed Tomography restoration.

Authors:  K A Saneera Hemantha Kulathilake; Nor Aniza Abdullah; Aznul Qalid Md Sabri; Khin Wee Lai
Journal:  Complex Intell Systems       Date:  2021-05-30

8.  Improving Diagnostic Accuracy in Low-Dose SPECT Myocardial Perfusion Imaging With Convolutional Denoising Networks.

Authors:  Albert Juan Ramon; Yongyi Yang; P Hendrik Pretorius; Karen L Johnson; Michael A King; Miles N Wernick
Journal:  IEEE Trans Med Imaging       Date:  2020-03-10       Impact factor: 11.037

9.  Low-dose CT image and projection dataset.

Authors:  Taylor R Moen; Baiyu Chen; David R Holmes; Xinhui Duan; Zhicong Yu; Lifeng Yu; Shuai Leng; Joel G Fletcher; Cynthia H McCollough
Journal:  Med Phys       Date:  2020-12-16       Impact factor: 4.071

10.  Deep learning with noise-to-noise training for denoising in SPECT myocardial perfusion imaging.

Authors:  Junchi Liu; Yongyi Yang; Miles N Wernick; P Hendrik Pretorius; Michael A King
Journal:  Med Phys       Date:  2020-11-23       Impact factor: 4.071

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