| Literature DB >> 29797607 |
Jeroen Cremer1, Sanne H I Hofstraat1, Francoise van Heiningen1, Irene K Veldhuijzen1, Birgit H B van Benthem1, Kimberley S M Benschop1.
Abstract
Genetic variation within hepatitis B surface antigen (HBsAg), in particular within the major hydrophobic region (MHR), is related to immune/vaccine and test failures and can have a significant impact on the vaccination and diagnosis of acute infection. This study shows, for the first time, variation among acute cases and compares the amino acid variation within the HBsAg between acute and chronic infections. We analyzed the virus isolated from 1231 acute and 585 chronic cases reported to an anonymized public health surveillance database between 2004 and 2014 in The Netherlands. HBsAg analysis revealed the circulation of 6 genotypes (Gt); GtA was the dominant genotype followed by GtD among both acute (68.2% and 17.4%, respectively) and chronic (34.9% and 34.2%, respectively) cases. Variation was the highest among chronic strains compared to that among acute strains. Both acute and chronic GtD showed the highest variation compared to that of other genotypes (P < .01). Substitutions within the MHR were found in 8.5% of the acute strains and 18.6% of the chronic strains. Specific MHR substitutions described to have an impact on vaccine/immune escape and/or HBsAg test failure were found among 4.1% of the acute strains and 7.0% of the chronic strains. In conclusion, we show a high variation of HBsAg among acute and chronic hepatitis B virus-infected cases in The Netherlands, in particular among those infected with GtD, and compare, for the first time, variation in frequencies between acute and chronic cases. Additional studies on the impact of these variations on vaccination and test failure need to be conducted, as well as whether HBsAg false-negative variants have been missed.Entities:
Keywords: amino acid variation; hepatitis B surface antigen; hepatitis B virus; major hydrophobic region; test failure; vaccination
Mesh:
Substances:
Year: 2018 PMID: 29797607 PMCID: PMC6120544 DOI: 10.1002/jmv.25232
Source DB: PubMed Journal: J Med Virol ISSN: 0146-6615 Impact factor: 2.327
Figure 1Maximum parsimony tree of the HBsAg of HBV strains isolated from 1232 Dutch acute HBV–infected cases characterized between 2004 and 2014. The cases are color‐coded by infection status and sex. Gt, genotype; HBsAg, hepatitis B surface antigen; HBV, hepatitis B virus
Distribution of HBV acute and chronic infected cases (strains) and HBsAg/major hydrophobic region (MHR) variation by genotype between 2004 and 2014
| Genotype | Cases, n (% of all cases) | Strains harboring variation in the HBsAg, n (% of Gt) | Strains harboring variation in MHR, n (% of Gt) | Number of substitutions within the MHR |
|---|---|---|---|---|
|
| ||||
| GtA | 839 (68.2) | 100 (11.9) | 23 (2.7) | 28 |
| GtB | 31 (2.5) | 13 (41.9) | 5 (16.1) | 5 |
| GtC | 61 (5.0) | 13 (21.3) | 5 (8.2) | 6 |
| GtD | 214 (17.4) | 88 (41.1) | 64 (29.9) | 73 |
| GtE | 51 (4.1) | 20 (39.2) | 7 (13.7) | 7 |
| GtF | 35 (2.8) | 9 (22.9) | 1 (2.9) | 1 |
| Total | 1231 | 243 (19.7) | 105 (8.5) | 120 |
|
| ||||
| GtA | 204 (34.9) | 86 (42.2) | 24 (11.8) | 30 |
| GtB | 68 (11.6) | 48 (70.6) | 19 (27.9) | 23 |
| GtC | 48 (8.2) | 27 (56.3) | 9 (18.8) | 14 |
| GtD | 200 (34.2) | 110 (55.0) | 46 (23.0) | 70 |
| GtE | 59 (10.1) | 37 (62.7) | 11 (18.6) | 14 |
| GtF | 6 (1) | 1 (16.7) | 0 (‐) | 0 |
| Total | 585 | 309 (52.8) | 109 (18.6) | 151 |
Figure 2Variation frequency within the HBsAg ranging from a no substitution to 1 to 10 substitutions among acute and chronic strains. The data set for acute cases is a representative set of acute HBV in The Netherlands. The data set for chronic cases only represents those with risk behavior from various risk groups (<2010) and in most cases from MSM (>2010). The HBsAg amino acid sequence variation of the 6 genotypes was compared to the respective reference type 7. HBsAg, hepatitis B surface antigen; HBV, hepatitis B virus; MSM, men who have sex with men
Figure 3Frequency and distribution of amino acid substitutions within the HBsAg (amino acid residues 1 to 203) of genotypes A to F. Acute strains are shown in blue bars and chronic strains are in red bars. Positions associated with vaccine/immune escape and/or test result are boxed. Gt, genotype; HBsAg, hepatitis B surface antigen
Number of strains with substitutions associated with vaccine escape (VEM) and/or HBsAg test failure located within the major hydrophobic regions (MHRs)
| Acute strains, n | Chronic strains, n | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Substitution | A | B | C | D | E | F | A | B | C | D | E | F | Association |
| Y100C | 2 | VEM and HBsAg test failure | |||||||||||
| Q101R | 4 | HBsAg test failure | |||||||||||
| M103I | 1 | 2 | 1 | 2 | HBsAg test failure | ||||||||
| L109I | 1 | VEM and HBsAg test failure | |||||||||||
| T118R | 1 | 1 | VEM and HBsAg test failure | ||||||||||
| P120T/S | 5 | 4 | 8 | VEM and HBsAg test failure | |||||||||
| R122K | 5 | 1 | 1 | HBsAg test failure | |||||||||
| T126I/S/A | 1 | 4 | VEM and HBsAg test failure | ||||||||||
| P127T/L | 2 | 4 | 2 | VEM and HBsAg test failure | |||||||||
| A128V | 1 | 10 | 1 | HBsAg test failure | |||||||||
| Q129R/H | 1 | 2 | 1 | 1 | 1 | 1 | VEM and HBsAg test failure | ||||||
| T131S/I | 1 | 1 | 1 | VEM and HBsAg test failure | |||||||||
| M133I | 3 | 1 | 1 | VEM and HBsAg test failure | |||||||||
| F/Y134N/L | 2 | 2 | 1 | 3 | VEM and HBsAg test failure | ||||||||
| T140I | 1 | VEM and HBsAg test failure | |||||||||||
| S143L | 1 | 1 | VEM and HBsAg test failure | ||||||||||
| D144A/E | 1 | 1 | 3 | VEM and HBsAg test failure | |||||||||
| G145R | 1 | VEM and HBsAg test failure | |||||||||||
| G145A | 1 | VEM and HBsAg test failure | |||||||||||
| E164G | 1 | 1 | HBsAg test failure | ||||||||||
| A168V | 1 | VEM and HBsAg test failure | |||||||||||
| Total | 10 | 3 | 0 | 39 | 3 | 1 | 6 | 8 | 4 | 22 | 4 | 0 | |
M103I/A128V/Q129R was found as a triple substitution in 1 GtA acute strain totaling to 8 acute GtA cases with MHR substitutions.
R122K/Q129R was found as a double substitution in 2 GtD acute strains and Y100C/L109I/T118R was found as a triple substitution in 1 GtD acute strain totaling to 35 acute GtD cases with MHR substitutions.
M103I/P120T/R122K was found as a triple substitution in 1 GtD chronic strain and M103I/P120S was found as a double substitution in 1 GtD chronic strain totaling to 19 acute GtD cases with MHR substitutions.
Gt, genotype; HBsAg, hepatitis B surface antigen; MHR, major hydrophobic region.
Distribution of reverse transcriptase substitutions among strains isolated from HBV acute and chronic infected cases by genotype between 2004 and 2014 and substitutions associated with antiviral resistance (AVR)
| Acute | Chronic | |||
|---|---|---|---|---|
| Genotype | n substitutions/strains harboring variation in the RT | Substitution associated with AVR (n strains) | n substitutions/strains harboring variation in the RT | Substitution associated with AVR (n strains) |
| GtA | 197/168 | V173L (1) | 137/79 | L180M (5) |
| GtB | 19/16 | 74/47 | ||
| GtC | 19/10 | 54/25 | ||
| GtD | 162/108 | V173L (1) | 230/132 | |
| GtE | 35/25 | 105/36 | ||
| GtF | 12/8 | 4/2 | ||
| Total | 444/335 | 604/321 | ||
V173L, L180M, and M204V are associated with lamivudine, telbivudine, and entecavir resistance, respectively; L180M + M204V are associated with lamivudine and telbivudine resistance; V173L is associated with lamivudine resistance.
L180M/M204V/V173L was found as a triple substitution in 1 acute strain.
L180M/M204V was found as a double substitution in 1 acute strain and 5 chronic strains.
AVR, antiviral resistance; Gt, genotype; RT, reverse transcriptase.