Literature DB >> 29782966

Epilepsy biomarkers - Toward etiology and pathology specificity.

Asla Pitkänen1, Xavier Ekolle Ndode-Ekane2, Niina Lapinlampi2, Noora Puhakka2.   

Abstract

A biomarker is a characteristic that is measured as an indicator of normal biologic processes, pathogenic processes, or responses to an exposure or intervention, including therapeutic interventions. Biomarker modalities include molecular, histologic, radiographic, or physiologic characteristics. In 2015, the FDA-NIH Joint Leadership Council developed the BEST Resource (Biomarkers, EndpointS, and other Tools) to improve the understanding and use of biomarker terminology in biomedical research, clinical practice, and medical product development. The BEST biomarker categories include: (a) susceptibility/risk biomarkers, (b) diagnostic biomarkers, (c) monitoring biomarkers, (d) prognostic biomarkers, (e) predictive biomarkers, (f) pharmacodynamic/response biomarkers, and (g) safety biomarkers. Here we review 30 epilepsy biomarker studies that have identified (a) diagnostic biomarkers for epilepsy, epileptogenesis, epileptogenicity, drug-refractoriness, and status epilepticus - some of the epileptogenesis and epileptogenicity biomarkers can also be considered prognostic biomarkers for the development of epilepsy in subjects with a given brain insult, (b) predictive biomarkers for epilepsy surgery outcome, and (c) a response biomarker for therapy outcome. The biomarker modalities include plasma/serum/exosomal and cerebrospinal fluid molecular biomarkers, brain tissue molecular biomarkers, imaging biomarkers, electrophysiologic biomarkers, and behavioral/cognitive biomarkers. Both single and combinatory biomarkers have been described. Most of the reviewed biomarkers have an area under the curve >0.800 in receiver operating characteristics analysis, suggesting high sensitivity and specificity. As discussed in this review, we are in the early phase of the learning curve in epilepsy biomarker discovery. Many of the seven biomarker categories lack epilepsy-related biomarkers. There is a need for epilepsy biomarker discovery using proper, statistically powered study designs with validation cohorts, and the development and use of novel analytical methods. A strategic roadmap to discuss the research priorities in epilepsy biomarker discovery, regulatory issues, and optimization of the use of resources, similar to those devised in the cancer and Alzheimer's disease research areas, is also needed.
Copyright © 2018 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Antiepileptogenesis; Area under the curve; Diagnosis; Electroencephalogram; Epileptogenesis; Magnetic resonance imaging; Receiver operating characteristics; microRNA

Mesh:

Substances:

Year:  2018        PMID: 29782966      PMCID: PMC6240498          DOI: 10.1016/j.nbd.2018.05.007

Source DB:  PubMed          Journal:  Neurobiol Dis        ISSN: 0969-9961            Impact factor:   5.996


  79 in total

1.  Cortical gene expression correlates of temporal lobe epileptogenicity.

Authors:  Abigail P McCallum; Matthew J Gallek; Wyatt Ramey; Ann Manziello; Marlys H Witte; Michael J Bernas; David M Labiner; Martin E Weinand
Journal:  Pathophysiology       Date:  2016-05-28

2.  On the use of partial area under the ROC curve for comparison of two diagnostic tests.

Authors:  Hua Ma; Andriy I Bandos; David Gur
Journal:  Biom J       Date:  2014-12-23       Impact factor: 2.207

3.  Support Vector Algorithms for Optimizing the Partial Area under the ROC Curve.

Authors:  Harikrishna Narasimhan; Shivani Agarwal
Journal:  Neural Comput       Date:  2017-05-31       Impact factor: 2.026

Review 4.  MicroRNA profiling: approaches and considerations.

Authors:  Colin C Pritchard; Heather H Cheng; Muneesh Tewari
Journal:  Nat Rev Genet       Date:  2012-04-18       Impact factor: 53.242

5.  Blood-brain barrier disruption in post-traumatic epilepsy.

Authors:  O Tomkins; I Shelef; I Kaizerman; A Eliushin; Z Afawi; A Misk; M Gidon; A Cohen; D Zumsteg; A Friedman
Journal:  J Neurol Neurosurg Psychiatry       Date:  2007-11-08       Impact factor: 10.154

6.  Evaluation of serum matrix metalloproteinase-3 as a biomarker for diagnosis of epilepsy.

Authors:  Rui Wang; Guang Qun Zeng; Xu Liu; Rui Zhan Tong; Dong Zhou; Zhen Hong
Journal:  J Neurol Sci       Date:  2016-06-14       Impact factor: 3.181

Review 7.  Standardization procedure for plasma biomarker analysis in rat models of epileptogenesis: Focus on circulating microRNAs.

Authors:  Erwin A van Vliet; Noora Puhakka; James D Mills; Prashant K Srivastava; Michael R Johnson; Paolo Roncon; Shalini Das Gupta; Jenni Karttunen; Michele Simonato; Katarzyna Lukasiuk; Jan A Gorter; Eleonora Aronica; Asla Pitkänen
Journal:  Epilepsia       Date:  2017-09-27       Impact factor: 5.864

8.  Circulating microRNAs are promising novel biomarkers for drug-resistant epilepsy.

Authors:  Jun Wang; Lan Tan; Lin Tan; Yan Tian; Jing Ma; Chen-Chen Tan; Hui-Fu Wang; Ying Liu; Meng-Shan Tan; Teng Jiang; Jin-Tai Yu
Journal:  Sci Rep       Date:  2015-05-18       Impact factor: 4.379

9.  Technical factors involved in the measurement of circulating microRNA biomarkers for the detection of colorectal neoplasia.

Authors:  Atsushi Yamada; Mary A Cox; Kristin A Gaffney; Amber Moreland; C Richard Boland; Ajay Goel
Journal:  PLoS One       Date:  2014-11-18       Impact factor: 3.240

10.  Altered microRNA profiles in plasma exosomes from mesial temporal lobe epilepsy with hippocampal sclerosis.

Authors:  Shaofeng Yan; Hua Zhang; Wenyan Xie; Fangang Meng; Kai Zhang; Yin Jiang; Xin Zhang; Jianguo Zhang
Journal:  Oncotarget       Date:  2017-01-17
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  30 in total

Review 1.  The role of exosomal microRNAs in central nervous system diseases.

Authors:  Yifei Yu; Kun Hou; Tong Ji; Xishu Wang; Yining Liu; Yangyang Zheng; Jinying Xu; Yi Hou; Guangfan Chi
Journal:  Mol Cell Biochem       Date:  2021-01-29       Impact factor: 3.396

2.  Harmonization of pipeline for preclinical multicenter plasma protein and miRNA biomarker discovery in a rat model of post-traumatic epileptogenesis.

Authors:  Alaa Kamnaksh; Noora Puhakka; Idrish Ali; Gregory Smith; Roxanne Aniceto; Jesse McCullough; Shalini Das Gupta; Xavier Ekolle Ndode-Ekane; Rhys Brady; Pablo Casillas-Espinosa; Matt Hudson; Cesar Santana-Gomez; Riikka Immonen; Pedro Andrade de Abreu; Nigel Jones; Sandy Shultz; Richard J Staba; Terence J O'Brien; Denes Agoston; Asla Pitkänen
Journal:  Epilepsy Res       Date:  2018-11-26       Impact factor: 3.045

3.  PREFACE: Antiepileptogenesis following traumatic brain injury.

Authors:  Aristea S Galanopoulou; Jerome Engel; Solomon L Moshé
Journal:  Neurobiol Dis       Date:  2018-10-09       Impact factor: 5.996

4.  Acute Non-Convulsive Status Epilepticus after Experimental Traumatic Brain Injury in Rats.

Authors:  Pedro Andrade; Ivette Banuelos-Cabrera; Niina Lapinlampi; Tomi Paananen; Robert Ciszek; Xavier Ekolle Ndode-Ekane; Asla Pitkänen
Journal:  J Neurotrauma       Date:  2019-02-25       Impact factor: 5.269

Review 5.  Imaging biomarkers of posttraumatic epileptogenesis.

Authors:  Rachael Garner; Marianna La Rocca; Paul Vespa; Nigel Jones; Martin M Monti; Arthur W Toga; Dominique Duncan
Journal:  Epilepsia       Date:  2019-10-08       Impact factor: 5.864

6.  Informatics tools to assess the success of procedural harmonization in preclinical multicenter biomarker discovery study on post-traumatic epileptogenesis.

Authors:  Robert Ciszek; Xavier Ekolle Ndode-Ekane; Cesar Santana Gomez; Pablo M Casillas-Espinosa; Idrish Ali; Gregory Smith; Noora Puhakka; Niina Lapinlampi; Pedro Andrade; Alaa Kamnaksh; Riikka Immonen; Tomi Paananen; Matthew R Hudson; Rhys D Brady; Sandy R Shultz; Terence J O'Brien; Richard J Staba; Jussi Tohka; Asla Pitkänen
Journal:  Epilepsy Res       Date:  2018-12-27       Impact factor: 3.045

7.  Harmonization of pipeline for preclinical multicenter MRI biomarker discovery in a rat model of post-traumatic epileptogenesis.

Authors:  Riikka Immonen; Gregory Smith; Rhys D Brady; David Wright; Leigh Johnston; Neil G Harris; Eppu Manninen; Raimo Salo; Craig Branch; Dominique Duncan; Ryan Cabeen; Xavier Ekolle Ndode-Ekane; Cesar Santana Gomez; Pablo M Casillas-Espinosa; Idrish Ali; Sandy R Shultz; Pedro Andrade; Noora Puhakka; Richard J Staba; Terence J O'Brien; Arthur W Toga; Asla Pitkänen; Olli Gröhn
Journal:  Epilepsy Res       Date:  2019-01-07       Impact factor: 3.045

Review 8.  Biomarkers for epileptogenesis and its treatment.

Authors:  Jerome Engel; Asla Pitkänen
Journal:  Neuropharmacology       Date:  2019-08-01       Impact factor: 5.250

Review 9.  Impact of predictive, preventive and precision medicine strategies in epilepsy.

Authors:  Rima Nabbout; Mathieu Kuchenbuch
Journal:  Nat Rev Neurol       Date:  2020-10-19       Impact factor: 42.937

Review 10.  Identification of clinically relevant biomarkers of epileptogenesis - a strategic roadmap.

Authors:  Michele Simonato; Denes V Agoston; Amy Brooks-Kayal; Chris Dulla; Brandy Fureman; David C Henshall; Asla Pitkänen; William H Theodore; Roy E Twyman; Firas H Kobeissy; Kevin K Wang; Vicky Whittemore; Karen S Wilcox
Journal:  Nat Rev Neurol       Date:  2021-02-16       Impact factor: 42.937

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