Literature DB >> 28960286

Standardization procedure for plasma biomarker analysis in rat models of epileptogenesis: Focus on circulating microRNAs.

Erwin A van Vliet1, Noora Puhakka2, James D Mills1, Prashant K Srivastava3, Michael R Johnson3, Paolo Roncon4, Shalini Das Gupta2, Jenni Karttunen2, Michele Simonato4,5, Katarzyna Lukasiuk6, Jan A Gorter7, Eleonora Aronica1, Asla Pitkänen2.   

Abstract

The World Health Organization estimates that globally 2.4 million people are diagnosed with epilepsy each year. In nearly 30% of these cases, epilepsy cannot be properly controlled by antiepileptic drugs. More importantly, treatments to prevent or modify epileptogenesis do not exist. Therefore, novel therapies are urgently needed. In this respect, it is important to identify which patients will develop epilepsy and which individually tailored treatment is needed. However, currently, we have no tools to identify the patients at risk, and diagnosis of epileptogenesis remains as a major unmet medical need, which relates to lack of diagnostic biomarkers for epileptogenesis. As the epileptogenic process in humans is typically slow, the use of animal models is justified to speed up biomarker discovery. We aim to summarize recommendations for molecular biomarker research and propose a standardized procedure for biomarker discovery in rat models of epileptogenesis. The potential of many phylogenetically conserved circulating noncoding small RNAs, including microRNAs (miRNAs), as biomarkers has been explored in various brain diseases, including epilepsy. Recent studies show the feasibility of detecting miRNAs in blood in both experimental models and human epilepsy. However, the analysis of circulating miRNAs in rodent models is challenging, which relates both to the lack of standardized sampling protocols and to analysis of miRNAs. We will discuss the issues critical for preclinical plasma biomarker discovery, such as documentation, blood and brain tissue sampling and collection, plasma separation and storage, RNA extraction, quality control, and RNA detection. We propose a protocol for standardization of procedures for discovery of circulating miRNA biomarkers in rat models of epileptogenesis. Ultimately, we hope that the preclinical standardization will facilitate clinical biomarker discovery for epileptogenesis in man. Wiley Periodicals, Inc.
© 2017 International League Against Epilepsy.

Entities:  

Keywords:  Blood; Brain; Discovery; Epilepsy; Preclinical

Mesh:

Substances:

Year:  2017        PMID: 28960286     DOI: 10.1111/epi.13915

Source DB:  PubMed          Journal:  Epilepsia        ISSN: 0013-9580            Impact factor:   5.864


  14 in total

1.  Harmonization of pipeline for preclinical multicenter plasma protein and miRNA biomarker discovery in a rat model of post-traumatic epileptogenesis.

Authors:  Alaa Kamnaksh; Noora Puhakka; Idrish Ali; Gregory Smith; Roxanne Aniceto; Jesse McCullough; Shalini Das Gupta; Xavier Ekolle Ndode-Ekane; Rhys Brady; Pablo Casillas-Espinosa; Matt Hudson; Cesar Santana-Gomez; Riikka Immonen; Pedro Andrade de Abreu; Nigel Jones; Sandy Shultz; Richard J Staba; Terence J O'Brien; Denes Agoston; Asla Pitkänen
Journal:  Epilepsy Res       Date:  2018-11-26       Impact factor: 3.045

Review 2.  Epilepsy biomarkers - Toward etiology and pathology specificity.

Authors:  Asla Pitkänen; Xavier Ekolle Ndode-Ekane; Niina Lapinlampi; Noora Puhakka
Journal:  Neurobiol Dis       Date:  2018-05-18       Impact factor: 5.996

Review 3.  Post-Traumatic Epilepsy and Comorbidities: Advanced Models, Molecular Mechanisms, Biomarkers, and Novel Therapeutic Interventions.

Authors:  Victoria M Golub; Doodipala Samba Reddy
Journal:  Pharmacol Rev       Date:  2022-04       Impact factor: 25.468

Review 4.  Discovery and validation of blood microRNAs as molecular biomarkers of epilepsy: Ways to close current knowledge gaps.

Authors:  Noelle Enright; Michele Simonato; David C Henshall
Journal:  Epilepsia Open       Date:  2018-10-30

5.  A companion to the preclinical common data elements for physiologic data in rodent epilepsy models. A report of the TASK3 Physiology Working Group of the ILAE/AES Joint Translational Task Force.

Authors:  Jan A Gorter; Erwin A van Vliet; Stefanie Dedeurwaerdere; Gordon F Buchanan; Daniel Friedman; Karin Borges; Heidi Grabenstatter; Katarzyna Lukasiuk; Helen E Scharfman; Astrid Nehlig
Journal:  Epilepsia Open       Date:  2018-10-11

6.  RT-rtPCR quantification of circulating microRNAs in plasma and serum samples from healthy domestic cats.

Authors:  Marcela C Scalon; Christine S Martins; Gabriel G Ferreira; Franciele Schlemmer; Ricardo Titze-de-Almeida; Giane R Paludo
Journal:  J Vet Diagn Invest       Date:  2021-07-23       Impact factor: 1.569

7.  Epigenetic Effects Mediated by Antiepileptic Drugs and their Potential Application.

Authors:  Fan-Cheng Kong; Chun-Lai Ma; Ming-Kang Zhong
Journal:  Curr Neuropharmacol       Date:  2020       Impact factor: 7.363

8.  The Effects of Ginsenoside Compound K Against Epilepsy by Enhancing the γ-Aminobutyric Acid Signaling Pathway.

Authors:  Xiangchang Zeng; Kai Hu; Lulu Chen; Luping Zhou; Wei Luo; Chaopeng Li; Wenjing Zong; Siyu Chen; Qing Gao; Guirong Zeng; Dejian Jiang; Xiaohui Li; Honghao Zhou; Dong-Sheng Ouyang
Journal:  Front Pharmacol       Date:  2018-09-11       Impact factor: 5.810

9.  In Vitro and In Vivo Pipeline for Validation of Disease-Modifying Effects of Systems Biology-Derived Network Treatments for Traumatic Brain Injury-Lessons Learned.

Authors:  Anssi Lipponen; Teemu Natunen; Mika Hujo; Robert Ciszek; Elina Hämäläinen; Jussi Tohka; Mikko Hiltunen; Jussi Paananen; David Poulsen; Emilia Kansanen; Xavier Ekolle Ndode-Ekane; Anna-Liisa Levonen; Asla Pitkänen
Journal:  Int J Mol Sci       Date:  2019-10-29       Impact factor: 5.923

10.  Circulating MicroRNAs as Novel Potential Biomarkers for Left Ventricular Remodeling in Postinfarction Heart Failure.

Authors:  Guangyuan Gao; Weiwei Chen; Miao Liu; Xu Yan; Ping Yang
Journal:  Dis Markers       Date:  2019-12-02       Impact factor: 3.434

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