Literature DB >> 29725087

Heterogeneity and specialized functions of translation machinery: from genes to organisms.

Naomi R Genuth1,2, Maria Barna3.   

Abstract

Regulation of mRNA translation offers the opportunity to diversify the expression and abundance of proteins made from individual gene products in cells, tissues and organisms. Emerging evidence has highlighted variation in the composition and activity of several large, highly conserved translation complexes as a means to differentially control gene expression. Heterogeneity and specialized functions of individual components of the ribosome and of the translation initiation factor complexes eIF3 and eIF4F, which are required for recruitment of the ribosome to the mRNA 5' untranslated region, have been identified. In this Review, we summarize the evidence for selective mRNA translation by components of these macromolecular complexes as a means to dynamically control the translation of the proteome in time and space. We further discuss the implications of this form of gene expression regulation for a growing number of human genetic disorders associated with mutations in the translation machinery.

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Year:  2018        PMID: 29725087      PMCID: PMC6813789          DOI: 10.1038/s41576-018-0008-z

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  233 in total

1.  Ribosomal proteins are targets for the NEDD8 pathway.

Authors:  Dimitris P Xirodimas; Anders Sundqvist; Akihiro Nakamura; Linnan Shen; Catherine Botting; Ronald T Hay
Journal:  EMBO Rep       Date:  2008-02-15       Impact factor: 8.807

2.  Mutation of Eif4g3, encoding a eukaryotic translation initiation factor, causes male infertility and meiotic arrest of mouse spermatocytes.

Authors:  Fengyun Sun; Kristina Palmer; Mary Ann Handel
Journal:  Development       Date:  2010-05       Impact factor: 6.868

3.  In vitro selection of RNA ligands for the ribosomal L22 protein associated with Epstein-Barr virus-expressed RNA by using randomized and cDNA-derived RNA libraries.

Authors:  M Dobbelstein; T Shenk
Journal:  J Virol       Date:  1995-12       Impact factor: 5.103

Review 4.  The role of eIF3 and its individual subunits in cancer.

Authors:  John W B Hershey
Journal:  Biochim Biophys Acta       Date:  2014-11-01

Review 5.  Ribosomopathies: There's strength in numbers.

Authors:  Eric W Mills; Rachel Green
Journal:  Science       Date:  2017-11-03       Impact factor: 47.728

6.  H/ACA small RNA dysfunctions in disease reveal key roles for noncoding RNA modifications in hematopoietic stem cell differentiation.

Authors:  Cristian Bellodi; Mary McMahon; Adrian Contreras; Dayle Juliano; Noam Kopmar; Tomoka Nakamura; David Maltby; Alma Burlingame; Sharon A Savage; Akiko Shimamura; Davide Ruggero
Journal:  Cell Rep       Date:  2013-05-23       Impact factor: 9.423

7.  Degradation of eukaryotic polypeptide chain initiation factor (eIF) 4G in response to induction of apoptosis in human lymphoma cell lines.

Authors:  M J Clemens; M Bushell; S J Morley
Journal:  Oncogene       Date:  1998-12-03       Impact factor: 9.867

8.  Characterization of RACK1 function in Drosophila development.

Authors:  Julie L Kadrmas; Mark A Smith; Stephen M Pronovost; Mary C Beckerle
Journal:  Dev Dyn       Date:  2007-08       Impact factor: 3.780

9.  A p53-dependent mechanism underlies macrocytic anemia in a mouse model of human 5q- syndrome.

Authors:  Jillian L Barlow; Lesley F Drynan; Duncan R Hewett; Luke R Holmes; Silvia Lorenzo-Abalde; Alison L Lane; Helen E Jolin; Richard Pannell; Angela J Middleton; See Heng Wong; Alan J Warren; James S Wainscoat; Jacqueline Boultwood; Andrew N J McKenzie
Journal:  Nat Med       Date:  2009-11-22       Impact factor: 53.440

10.  Eukaryotic ribosomal protein RPS25 interacts with the conserved loop region in a dicistroviral intergenic internal ribosome entry site.

Authors:  Takashi Nishiyama; Hiroshi Yamamoto; Toshio Uchiumi; Nobuhiko Nakashima
Journal:  Nucleic Acids Res       Date:  2007-02-07       Impact factor: 16.971

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  68 in total

1.  Toxins that Trash Translation.

Authors:  Allen R Buskirk
Journal:  Mol Cell       Date:  2018-06-07       Impact factor: 17.970

2.  The expanding repertoire of hereditary information carriers.

Authors:  Ying Zhang; Qi Chen
Journal:  Development       Date:  2019-03-15       Impact factor: 6.868

3.  RACK1 evolved species-specific multifunctionality in translational control through sequence plasticity within a loop domain.

Authors:  Madeline G Rollins; Sujata Jha; Elizabeth T Bartom; Derek Walsh
Journal:  J Cell Sci       Date:  2019-06-19       Impact factor: 5.285

Review 4.  Ribosome Stoichiometry: From Form to Function.

Authors:  Edward Emmott; Marko Jovanovic; Nikolai Slavov
Journal:  Trends Biochem Sci       Date:  2018-11-22       Impact factor: 13.807

Review 5.  Functions of RNA N6-methyladenosine modification in cancer progression.

Authors:  Bing Chen; Ya Li; Ruifeng Song; Chen Xue; Feng Xu
Journal:  Mol Biol Rep       Date:  2019-02-20       Impact factor: 2.316

Review 6.  Functions of RNA N6-methyladenosine modification in cancer progression.

Authors:  Bing Chen; Ya Li; Ruifeng Song; Chen Xue; Feng Xu
Journal:  Mol Biol Rep       Date:  2019-03-25       Impact factor: 2.316

Review 7.  Making ends meet: New functions of mRNA secondary structure.

Authors:  Dmitri N Ermolenko; David H Mathews
Journal:  Wiley Interdiscip Rev RNA       Date:  2020-06-29       Impact factor: 9.957

8.  Compensation between Wnt-driven tumorigenesis and cellular responses to ribosome biogenesis inhibition in the murine intestinal epithelium.

Authors:  Aurélien Raveux; Aline Stedman; Sabrina Coqueran; Sandrine Vandormael-Pournin; Nick Owens; Béatrice Romagnolo; Michel Cohen-Tannoudji
Journal:  Cell Death Differ       Date:  2020-04-30       Impact factor: 15.828

9.  Control of ribosomal protein synthesis by the Microprocessor complex.

Authors:  Xuan Jiang; Amit Prabhakar; Stephanie M Van der Voorn; Prajakta Ghatpande; Barbara Celona; Srivats Venkataramanan; Lorenzo Calviello; Chuwen Lin; Wanpeng Wang; Brian L Black; Stephen N Floor; Giorgio Lagna; Akiko Hata
Journal:  Sci Signal       Date:  2021-02-23       Impact factor: 8.192

10.  Jekyll and Hyde: Activating the Hypoxic Translational Machinery.

Authors:  J J David Ho; Jonathan H Schatz; Jim Uniacke; Stephen Lee
Journal:  Trends Biochem Sci       Date:  2020-12-09       Impact factor: 13.807

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