| Literature DB >> 29695090 |
Wenchao Li1, Jingjian Liu2, Minghua Fan3, Zhongtang Li4, Yin Chen5, Guisen Zhang6, Zhuo Huang7, Liangren Zhang8.
Abstract
GLYX-13, a NMDAR glycine-site partial agonist, was discovered as a promising antidepressant with rapidly acting effects but no ketamine-like side effects. However, the reported synthetic process route had deficiencies of low yield and the use of unfriendly reagents. Here, we report a scaled-up synthesis of GLYX-13 with an overall yield of 30% on the hectogram scale with a column chromatography-free strategy, where the coupling and deprotection reaction conditions were systematically optimized. Meanwhile, the absolute configuration of precursor compound of GLYX-13 was identified by X-ray single crystal diffraction. Finally, the activity of GLYX-13 was verified in the cortical neurons of mice through whole-cell voltage-clamp technique.Entities:
Keywords: GLYX-13; NMDA receptor; chromatography-free synthesis; crystal structure; whole-cell voltage-clamp
Mesh:
Substances:
Year: 2018 PMID: 29695090 PMCID: PMC6102568 DOI: 10.3390/molecules23050996
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1Retrosynthesis of GLYX-13.
Scheme 1The initial intended synthetic route of intermediate 3.
Scheme 2The optimized synthetic route of intermediate 3.
Scheme 3The initial synthetic route to intermediate 5.
Scheme 4Improved synthetic route of 5.
Coupling reaction conditions optimization in the synthesis of 4.
| Entry | Method | Base | Reaction Solvent a | Impurity b |
|---|---|---|---|---|
| 1 | EDCI/HOBt | DIPEA | DCM | Obvious |
| 2 | EDCI/DMAP | DIPEA | DCM | Obvious |
| 3 | EDCI/HOSu | DIPEA NaHCO3 | DCM/THF | Obvious |
| 4 | EDCI/HONp | DIPEA NaHCO3 | DCM/THF | Obvious |
| 5 | TsCl | NMM | DCM, THF, ACN | Obvious |
| 6 | TsCl | NMI | DCM, THF, ACN | Obvious |
| 7 | Cyanuric chloride | NMM | ACN/Acetone/DMF | Obvious |
| 8 | Cyanuric chloride | NMM | THF/toluene | Trace |
| 9 | PivCl | TEA | THF/DCM | Trace |
| 10 | PivCl | Imidazole | THF/DCM | Trace |
a THF/DCM was the optimal reaction solvent; b Impurity was detected by TLC.
Reaction conditions optimization of benzyl deprotection in the synthesis of 5.
| Entry | Method | Reaction Solvent | Yield (%) |
|---|---|---|---|
| 1 | Pd/C, H2 | MeOH | - |
| 2 | Pd/C, H2 | EtOH | - |
| 3 | Pd/C, HCOONH4 | MeOH | - |
| 4 | Pd/C, HCOOH | MeOH | - |
| 5 | Pd/C, Et3SiH | MeOH | 65% |
| 6 | Pd/C, Et3SiH | EtOH | 68% |
Figure 2Schematic representation of the isolation of 5 from the reaction mixture.
Scheme 5“2 + 2” fragment coupling reaction and final two deprotection reactions.
Figure 3Crystal structure of 7.
Figure 4X-ray powder diffraction analysis of 7. Black represented the tested diffraction pattern diagram of intermediate 7, red represented the simulated diffraction pattern using Mercury 3.9 software.
Figure 5GLYX-13 potentiated responses of NMDA receptors in mice primary cortical neurons. (A) Inward INMDA were activated by application of 100 μM NMDA and co-application of 100 μM NMDA and 30 μM GLYX-13; (B) Mean and standard error (shown in red) of whole cell INMDA in the presence of 100 μM NMDA and 100 μM NMDA together with 30 μM GLYX-13. Black circles illustrated INMDA from individual experiments. *** p < 0.001, paired two-tailed Student’s t-test; (C) Inward NMDAR-mediated currents were activated by application of 100 μM NMDA with six different concentrations of GLYX-13; (D) Concentration-response curve for the effect of GLYX-13 on NMDA receptors. Data were represented as mean ± s.e.m.