Literature DB >> 29677350

Validating Variational Bayes Linear Regression Method With Multi-Central Datasets.

Hiroshi Murata1, Linda M Zangwill2, Yuri Fujino1, Masato Matsuura1, Atsuya Miki3, Kazunori Hirasawa4,5, Masaki Tanito6, Shiro Mizoue7, Kazuhiko Mori8, Katsuyoshi Suzuki9, Takehiro Yamashita10, Kenji Kashiwagi11, Nobuyuki Shoji5, Ryo Asaoka1.   

Abstract

Purpose: To validate the prediction accuracy of variational Bayes linear regression (VBLR) with two datasets external to the training dataset. Method: The training dataset consisted of 7268 eyes of 4278 subjects from the University of Tokyo Hospital. The Japanese Archive of Multicentral Databases in Glaucoma (JAMDIG) dataset consisted of 271 eyes of 177 patients, and the Diagnostic Innovations in Glaucoma Study (DIGS) dataset includes 248 eyes of 173 patients, which were used for validation. Prediction accuracy was compared between the VBLR and ordinary least squared linear regression (OLSLR). First, OLSLR and VBLR were carried out using total deviation (TD) values at each of the 52 test points from the second to fourth visual fields (VFs) (VF2-4) to 2nd to 10th VF (VF2-10) of each patient in JAMDIG and DIGS datasets, and the TD values of the 11th VF test were predicted every time. The predictive accuracy of each method was compared through the root mean squared error (RMSE) statistic.
Results: OLSLR RMSEs with the JAMDIG and DIGS datasets were between 31 and 4.3 dB, and between 19.5 and 3.9 dB. On the other hand, VBLR RMSEs with JAMDIG and DIGS datasets were between 5.0 and 3.7, and between 4.6 and 3.6 dB. There was statistically significant difference between VBLR and OLSLR for both datasets at every series (VF2-4 to VF2-10) (P < 0.01 for all tests). However, there was no statistically significant difference in VBLR RMSEs between JAMDIG and DIGS datasets at any series of VFs (VF2-2 to VF2-10) (P > 0.05). Conclusions: VBLR outperformed OLSLR to predict future VF progression, and the VBLR has a potential to be a helpful tool at clinical settings.

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Year:  2018        PMID: 29677350      PMCID: PMC5886131          DOI: 10.1167/iovs.17-22907

Source DB:  PubMed          Journal:  Invest Ophthalmol Vis Sci        ISSN: 0146-0404            Impact factor:   4.799


  17 in total

1.  Response variability in the visual field: comparison of optic neuritis, glaucoma, ocular hypertension, and normal eyes.

Authors:  D B Henson; S Chaudry; P H Artes; E B Faragher; A Ansons
Journal:  Invest Ophthalmol Vis Sci       Date:  2000-02       Impact factor: 4.799

2.  Effect of patient experience on the results of automated perimetry in glaucoma suspect patients.

Authors:  E B Werner; T Krupin; A Adelson; M E Feitl
Journal:  Ophthalmology       Date:  1990-01       Impact factor: 12.079

3.  Comparison of visual field defects in normal-tension glaucoma and high-tension glaucoma.

Authors:  J Caprioli; M Sears; G L Spaeth
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4.  Latanoprost for open-angle glaucoma (UKGTS): a randomised, multicentre, placebo-controlled trial.

Authors:  David F Garway-Heath; David P Crabb; Catey Bunce; Gerassimos Lascaratos; Francesca Amalfitano; Nitin Anand; Augusto Azuara-Blanco; Rupert R Bourne; David C Broadway; Ian A Cunliffe; Jeremy P Diamond; Scott G Fraser; Tuan A Ho; Keith R Martin; Andrew I McNaught; Anil Negi; Krishna Patel; Richard A Russell; Ameet Shah; Paul G Spry; Katsuyoshi Suzuki; Edward T White; Richard P Wormald; Wen Xing; Thierry G Zeyen
Journal:  Lancet       Date:  2014-12-19       Impact factor: 79.321

5.  Visual field damage in normal-tension and high-tension glaucoma.

Authors:  B C Chauhan; S M Drance; G R Douglas; C A Johnson
Journal:  Am J Ophthalmol       Date:  1989-12-15       Impact factor: 5.258

6.  A new approach to measure visual field progression in glaucoma patients using variational bayes linear regression.

Authors:  Hiroshi Murata; Makoto Araie; Ryo Asaoka
Journal:  Invest Ophthalmol Vis Sci       Date:  2014-11-20       Impact factor: 4.799

7.  Analysis of visual field progression in glaucoma.

Authors:  F W Fitzke; R A Hitchings; D Poinoosawmy; A I McNaught; D P Crabb
Journal:  Br J Ophthalmol       Date:  1996-01       Impact factor: 4.638

8.  The number of people with glaucoma worldwide in 2010 and 2020.

Authors:  H A Quigley; A T Broman
Journal:  Br J Ophthalmol       Date:  2006-03       Impact factor: 4.638

9.  Detecting changes in retinal function: Analysis with Non-Stationary Weibull Error Regression and Spatial enhancement (ANSWERS).

Authors:  Haogang Zhu; Richard A Russell; Luke J Saunders; Stefano Ceccon; David F Garway-Heath; David P Crabb
Journal:  PLoS One       Date:  2014-01-17       Impact factor: 3.240

10.  A novel method to predict visual field progression more accurately, using intraocular pressure measurements in glaucoma patients.

Authors: 
Journal:  Sci Rep       Date:  2016-08-26       Impact factor: 4.379

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  6 in total

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Journal:  Surv Ophthalmol       Date:  2020-04-26       Impact factor: 6.048

2.  Ganglion Cell Complex: The Optimal Measure for Detection of Structural Progression in the Macula.

Authors:  Vahid Mohammadzadeh; Erica Su; Alessandro Rabiolo; Lynn Shi; Sepideh Heydar Zadeh; Simon K Law; Anne L Coleman; Joseph Caprioli; Robert E Weiss; Kouros Nouri-Mahdavi
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3.  Estimating Ganglion Cell Complex Rates of Change With Bayesian Hierarchical Models.

Authors:  Vahid Mohammadzadeh; Erica Su; Sepideh Heydar Zadeh; Simon K Law; Anne L Coleman; Joseph Caprioli; Robert E Weiss; Kouros Nouri-Mahdavi
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4.  Comparing the usefulness of a new algorithm to measure visual field using the variational Bayes linear regression in glaucoma patients, in comparison to the Swedish interactive thresholding algorithm.

Authors:  Hiroshi Murata; Ryo Asaoka; Yuri Fujino; Masato Matsuura; Kazunori Hirasawa; Satoshi Shimada; Nobuyuki Shoji
Journal:  Br J Ophthalmol       Date:  2021-01-13       Impact factor: 5.908

Review 5.  A Review of Deep Learning for Screening, Diagnosis, and Detection of Glaucoma Progression.

Authors:  Atalie C Thompson; Alessandro A Jammal; Felipe A Medeiros
Journal:  Transl Vis Sci Technol       Date:  2020-07-22       Impact factor: 3.283

6.  The usefulness of the Deep Learning method of variational autoencoder to reduce measurement noise in glaucomatous visual fields.

Authors:  Ryo Asaoka; Hiroshi Murata; Shotaro Asano; Masato Matsuura; Yuri Fujino; Atsuya Miki; Masaki Tanito; Shiro Mizoue; Kazuhiko Mori; Katsuyoshi Suzuki; Takehiro Yamashita; Kenji Kashiwagi; Nobuyuki Shoji
Journal:  Sci Rep       Date:  2020-05-12       Impact factor: 4.379

  6 in total

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