| Literature DB >> 29670670 |
Roberto Rodrigues Ferreira1, Fabiana da Silva Madeira2, Gabriel Farias Alves2, Mayara da Costa Chambela2, Eduardo de Oliveira Vaz Curvo2, Aline Dos Santos Moreira1, Renata Almeida de Sá1, Leila Mendonça-Lima1, Pedro Hernan Cabello3,4, Sabine Bailly5,6,7, Jean-Jacques Feige5,6,7, Tania Cremonini Araujo-Jorge8, Roberto Magalhães Saraiva2, Mariana Caldas Waghabi1.
Abstract
Transforming growth factor β1 (TGF-β1) is an important mediator in Chagas disease. Furthermore, patients with higher TGF-β1 serum levels show a worse clinical outcome. Gene polymorphism may account for differences in cytokine production during infectious diseases. We tested whether TGFB1 polymorphisms could be associated with Chagas disease susceptibility and severity in a Brazilian population. We investigated five single-nucleotide polymorphisms (-800 G>A, -509 C>T, +10 T>C, +25 G>C, and +263 C>T). 152 patients with Chagas disease (53 with the indeterminate form and 99 with the cardiac form) and 48 noninfected subjects were included. Genotypes CT and TT at position -509 of the TGFB1 gene were more frequent in Chagas disease patients than in noninfected subjects. Genotypes TC and CC at codon +10 of the TGFB1 gene were also more frequent in Chagas disease patients than in noninfected subjects. We found no significant differences in the distribution of the studied TGFB1 polymorphisms between patients with the indeterminate or cardiac form of Chagas disease. Therefore, -509 C>T and +10 T>C TGFB1 polymorphisms are associated with Chagas disease susceptibility in a Brazilian population.Entities:
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Year: 2018 PMID: 29670670 PMCID: PMC5835243 DOI: 10.1155/2018/4579198
Source DB: PubMed Journal: Dis Markers ISSN: 0278-0240 Impact factor: 3.434
Primer sequences and expected size of the amplified fragment (bp) used to analyze TGFB1 gene polymorphisms.
| Region | SNP | Base change | dbSNP code | Primer | bp |
|---|---|---|---|---|---|
| Promoter | −800 | G>A | rs1800468 | (F)5′-cagttggcgagaacagttgg-3′ | 594 |
| −509 | C>T | rs1800469 | (R)5′-agaacggaaggagagtcagg-3′ | ||
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| Exon 01 | +10 | T>C | rs1800470 | (F)5′-attcaagaccacccaccttc-3′ | 730 |
| +25 | G>C | rs1800471 | (R)5′-gctcagtgccatcctcttt-3′ | ||
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| Exon 05 | +263 | C>T | rs1800472 | (F)5′-tttgctccttccttcctcttc-3′ | 700 |
Demographic and clinical characteristics of the study population.
| Noninfected | IND | A + B | C + D | |
|---|---|---|---|---|
|
| 55 ± 13 | 52 ± 11 | 61 ± 10∗† | 58 ± 13∗† |
|
| 16 (32%) | 24 (45%) | 16 (33%) | 26 (52%) |
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| North | 0 | 0 | 0 | 1 (2%) |
| Northeast | 36 (75%) | 42 (79%) | 27 (55%)† | 35 (70%) |
| Midwest | 0 | 0 | 1 (2%) | 2 (4%) |
| Southeast | 12 (25%) | 8 (15%) | 21 (43%)† | 12 (24%) |
| South | 0 | 3 (5%) | 0 | 0 |
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| 26 (55%) | 25 (47%) | 26 (53%) | 21 (42%) |
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| 10 (20%) | 6 (11%) | 4 (8%) | 5 (10%) |
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| 4 (8%) | 1 (2%) | 1 (2%) | 1 (2%) |
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| 15 (31%) | 12 (23%) | 15 (31%) | 13 (26%) |
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| 2 (4%) | 2 (4%) | 3 (6%) | 1 (2%) |
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| 65 ± 10 | 71 ± 7 | 63 ± 13† | 35 ± 11∗†‡ |
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| ACE inhibitor | — | 15 (28%) | 20 (41%) | 29 (58%) |
| ARB | — | 4 (8%) | 17 (35%) | 21 (42%) |
| Spironolactone | — | 0 | 6 (12%) | 39 (78%) |
| Carvedilol | — | 0 | 15 (31%) | 48 (96%) |
| Amiodarone | — | 0 | 7 (14%) | 18 (36%) |
| Furosemide | — | 0 | 8 (16%) | 46 (92%) |
| Digoxin | — | 0 | 2 (4%) | 21 (42%) |
| Warfarin | — | 0 | 9 (18%) | 20 (40%) |
| Hydrochlorothiazide | — | 13 (25%) | 16 (33%) | 11 (22%) |
| Simvastatin | — | 16 (30%) | 17 (35%) | 20 (40%) |
ACE: angiotensin-converting enzyme; ARB: angiotensin receptor blockers; CAD: coronary artery disease; LVEF: left ventricular ejection fraction n (%). ∗P < 0.05 versus noninfected, †P < 0.05 versus patients with the indeterminate form, and ‡P < 0.05 versus patients at stage A or B of the cardiac form.
Figure 1Electropherogram analysis showing the sequencing results for two TGFB1 regions: −509 C/T and codon +10 T/C. Examples of electropherograms without polymorphism in the −509 C/T region (a) and in codon +10 T/C (b) and with polymorphism in the −509 C/T region (c) and in codon +10 T/C (d). In (b) and (d), amino acid changes are indicated inside the boxes.
Genotype and allele distribution of TGFB1 polymorphisms among noninfected subjects and patients with Chagas disease.
| Chagas disease | Noninfected | OR (95% CI) |
|
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|---|---|---|---|---|---|---|
| −800 G/A | ||||||
| Genotype | GG | 134 (88.2) | 45 (93.75) | Reference | ||
| AG | 17 (11.2) | 3 (6.25) | 1.69 (0.54–5.26) | 0.36 | 0.63 | |
| AA | 1 (0.65) | 0 (0.0) | 1.01 (0.09–11.46) | 0.99 | 0.99 | |
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| Allele | G | 285 (93.75) | 93 (96.88) | Reference | ||
| A | 19 (6.25) | 3 (3.13) | 1.82 (0.61–5.47) | 0.28 | 0.56 | |
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| −509 C/T | ||||||
| Genotype | CC | 10 (6.6) | 15 (31.25) | Reference | ||
| CT | 68 (44.7) | 16 (33.33) | 6.13 (2.41–15.58) |
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| TT | 74 (48.7) | 17 (35.42) | 6.28 (2.49–15.83) |
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| Allele | C | 88 (28.95) | 46 (47.92) | Reference | ||
| T | 216 (71.05) | 50 (52.08) | 2.25 (1.40–3.60) |
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| +10 T/C | ||||||
| Genotype | TT | 14 (9.2) | 17 (35.42) | Reference | ||
| TC | 93 (61.2) | 17 (35.42) | 6.64 (2.75–15.10) |
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| CC | 45 (29.6) | 14 (29.17) | 3.90 (1.54–9.31) |
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| Allele | T | 121 (39.80) | 51 (53.13) | Reference | ||
| C | 183 (60.20) | 45 (46.88) | 1.71 (1.10–2.70) |
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| +25 G/C | ||||||
| Genotype | GG | 131 (86.2) | 43 (89.58) | Reference | ||
| CG | 20 (13.2) | 5 (10.42) | 1.23 (0.47–3.25) | 0.67 | 0.79 | |
| CC | 1 (0. 7) | 0 (0.0) | 1.01 (0.09–11.38) | 0.99 | 0.99 | |
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| Allele | G | 282 (92.76) | 91 (94.79) | Reference | ||
| C | 22 (7.24) | 5 (5.21) | 1.32 (0.52–3.35) | 0.55 | 0.79 | |
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| Genotype | CC | 145 (96.0) | 47 (97.92) | Reference | ||
| CT | 6 (3.95) | 1 (2.08) | 1.41 (0.28–7.04) | 0.67 | 0.79 | |
| TT | 0 (0.0) | 0 (0.0) | — | — | ||
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| Allele | C | 296 (98.03) | 95 (98.96) | Reference | ||
| T | 6 (1.97) | 1 (1.04) | 1.40 (0.28–6.83) | 0.68 | 0.79 | |
Genotype and allele distribution of TGFB1 –800 G/A, −509 C/T, +10 T/C, +25 G/C, and +263 C/T polymorphisms among patients with indeterminate and cardiac forms of Chagas disease.
| IND | A + B | C + D |
| |
|---|---|---|---|---|
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| GG | 45 (84.91) | 46 (86.79) | 43 (81.13) | 2.15 (0.71) |
| AG | 8 (15.09) | 3 (5.66) | 6 (11.32) | |
| AA | 0 (0) | 0 (0) | 1 (1.89) | |
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| G | 98 (92.45) | 95 (96.94) | 92 (92.00) | 2.53 (0.28) |
| A | 8 (7.55) | 3 (3.06) | 8 (8) | |
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| −509 C/T | ||||
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| CC | 3 (5.66) | 4 (7.55) | 3 (5.66) | 0.58 (0.96) |
| CT | 23 (43.40) | 24 (45.28) | 21 (39.62) | |
| TT | 27 (50.94) | 21 (39.62) | 26 (49.06) | |
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| C | 29 (27.36) | 32 (32.65) | 27 (27.00) | 0.97 (0.61) |
| T | 77 (72.64) | 66 (67.35) | 73 (73.00) | |
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| +10 T/C | ||||
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| TT | 3 (5.66) | 8 (15.09) | 3 (5.66) | 4.08 (0.39) |
| TC | 31 (58.49) | 31 (58.49) | 31 (58.49) | |
| CC | 19 (35.85) | 10 (18.87) | 16 (30.19) | |
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| T | 37 (34.91) | 47 (47.96) | 37 (37.00) | 4.11 (0.13) |
| C | 69 (65.09) | 51 (52.04) | 63 (63.00) | |
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| GG | 47 (88.68) | 43 (81.13) | 41 (77.36) | 1.63 (0.80) |
| GC | 5 (9.43) | 6 (11.32) | 9 (16.98) | |
| CC | 1 (1.89) | 0 (0) | 0 (0) | |
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| G | 99 (93.40) | 92 (93.88) | 91 (91.00) | 0.71 (0.70) |
| C | 7 (6.60) | 6 (6.12) | 9 (9.00) | |
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| CC | 51 (96.23) | 47 (88.68) | 48 (90.57) | 0.01 (0.99) |
| CT | 2 (3.77) | 2 (3.77) | 2 (3.77) | |
| TT | 0 (0) | 0 (0) | 0 (0) | |
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| C | 104 (98.11) | 96 (97.96) | 98 (98.00) | 0.01 (0.99) |
| T | 2 (1.89) | 2 (2.04) | 2 (2.00) | |
| Population | Chagas disease | Noninfected | Total | OR | 95% CI (OR) | |||
|---|---|---|---|---|---|---|---|---|
| C | T | C | T | |||||
| Peru | 94 | 42 | 95 | 69 | 300 | 1.6182 | 1.0073 | 2.5994 |
| Colombia | 376 | 174 | 233 | 161 | 944 | 1.4932 | 1.1405 | 1.9526 |
| Brazil | 183 | 121 | 45 | 51 | 400 | 1.7140 | 1.0813 | 2.7025 |
| Total |
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| Heterogeneity test | |||
|---|---|---|---|
| Source |
| df |
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| Significance | 13.3043 | 1 |
|
| Heterogeneity | 4.397 | 2 | 0.1086 |
| Total | 17.7440 | 3 |
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