Literature DB >> 29579400

Biomolecular Ultrasound and Sonogenetics.

David Maresca1, Anupama Lakshmanan2, Mohamad Abedi2, Avinoam Bar-Zion1, Arash Farhadi2, George J Lu1, Jerzy O Szablowski1, Di Wu3, Sangjin Yoo1, Mikhail G Shapiro1.   

Abstract

Visualizing and modulating molecular and cellular processes occurring deep within living organisms is fundamental to our study of basic biology and disease. Currently, the most sophisticated tools available to dynamically monitor and control cellular events rely on light-responsive proteins, which are difficult to use outside of optically transparent model systems, cultured cells, or surgically accessed regions owing to strong scattering of light by biological tissue. In contrast, ultrasound is a widely used medical imaging and therapeutic modality that enables the observation and perturbation of internal anatomy and physiology but has historically had limited ability to monitor and control specific cellular processes. Recent advances are beginning to address this limitation through the development of biomolecular tools that allow ultrasound to connect directly to cellular functions such as gene expression. Driven by the discovery and engineering of new contrast agents, reporter genes, and bioswitches, the nascent field of biomolecular ultrasound carries a wave of exciting opportunities.

Entities:  

Keywords:  biomolecular; gas vesicles; imaging; reporter gene; sonogenetics; ultrasound

Mesh:

Substances:

Year:  2018        PMID: 29579400      PMCID: PMC6086606          DOI: 10.1146/annurev-chembioeng-060817-084034

Source DB:  PubMed          Journal:  Annu Rev Chem Biomol Eng        ISSN: 1947-5438            Impact factor:   11.059


  128 in total

1.  Spatial and temporal control of transgene expression in vivo using a heat-sensitive promoter and MRI-guided focused ultrasound.

Authors:  E Guilhon; P Voisin; J A de Zwart; B Quesson; R Salomir; C Maurange; V Bouchaud; P Smirnov; H de Verneuil; A Vekris; P Canioni; C T W Moonen
Journal:  J Gene Med       Date:  2003-04       Impact factor: 4.565

Review 2.  Trp ion channels and temperature sensation.

Authors:  Ajay Dhaka; Veena Viswanath; Ardem Patapoutian
Journal:  Annu Rev Neurosci       Date:  2006       Impact factor: 12.449

Review 3.  Ultrasound-biophysics mechanisms.

Authors:  William D O'Brien
Journal:  Prog Biophys Mol Biol       Date:  2006-08-08       Impact factor: 3.667

Review 4.  Noninvasive neuromodulation with ultrasound? A continuum mechanics hypothesis.

Authors:  William J Tyler
Journal:  Neuroscientist       Date:  2010-01-25       Impact factor: 7.519

5.  High frequency ultrasound tissue characterization and acoustic microscopy of intracellular changes.

Authors:  Sebastian Brand; Eike C Weiss; Robert M Lemor; Michael C Kolios
Journal:  Ultrasound Med Biol       Date:  2008-04-24       Impact factor: 2.998

6.  A proteinaceous gene regulatory thermometer in Salmonella.

Authors:  R Hurme; K D Berndt; S J Normark; M Rhen
Journal:  Cell       Date:  1997-07-11       Impact factor: 41.582

7.  Cassette-based presentation of SIV epitopes with recombinant gas vesicles from halophilic archaea.

Authors:  Elizabeth S Stuart; Fazeela Morshed; Marinko Sremac; Shiladitya DasSarma
Journal:  J Biotechnol       Date:  2004-11-09       Impact factor: 3.307

Review 8.  Production of recombinant proteins in E. coli by the heat inducible expression system based on the phage lambda pL and/or pR promoters.

Authors:  Norma A Valdez-Cruz; Luis Caspeta; Néstor O Pérez; Octavio T Ramírez; Mauricio A Trujillo-Roldán
Journal:  Microb Cell Fact       Date:  2010-03-19       Impact factor: 5.328

9.  The human heat-shock protein family. Expression of a novel heat-inducible HSP70 (HSP70B') and isolation of its cDNA and genomic DNA.

Authors:  T K Leung; M Y Rajendran; C Monfries; C Hall; L Lim
Journal:  Biochem J       Date:  1990-04-01       Impact factor: 3.857

10.  De novo design of heat-repressible RNA thermosensors in E. coli.

Authors:  Allison Hoynes-O'Connor; Kristina Hinman; Lukas Kirchner; Tae Seok Moon
Journal:  Nucleic Acids Res       Date:  2015-05-15       Impact factor: 16.971

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  20 in total

1.  Acoustic biosensors for ultrasound imaging of enzyme activity.

Authors:  Anupama Lakshmanan; Zhiyang Jin; Suchita P Nety; Daniel P Sawyer; Audrey Lee-Gosselin; Dina Malounda; Mararet B Swift; David Maresca; Mikhail G Shapiro
Journal:  Nat Chem Biol       Date:  2020-07-13       Impact factor: 15.040

Review 2.  Ultrasound Technologies for Imaging and Modulating Neural Activity.

Authors:  Claire Rabut; Sangjin Yoo; Robert C Hurt; Zhiyang Jin; Hongyi Li; Hongsun Guo; Bill Ling; Mikhail G Shapiro
Journal:  Neuron       Date:  2020-10-14       Impact factor: 17.173

3.  Biomolecular Ultrasound Imaging of Phagolysosomal Function.

Authors:  Bill Ling; Justin Lee; David Maresca; Audrey Lee-Gosselin; Dina Malounda; Margaret B Swift; Mikhail G Shapiro
Journal:  ACS Nano       Date:  2020-09-14       Impact factor: 15.881

4.  Ultrasound for the treatment of acute kidney injury and other inflammatory conditions: a promising path toward noninvasive neuroimmune regulation.

Authors:  Jieru Cai; William T Nash; Mark D Okusa
Journal:  Am J Physiol Renal Physiol       Date:  2020-06-08

5.  Ultrasound imaging of gene expression in mammalian cells.

Authors:  Arash Farhadi; Gabrielle H Ho; Daniel P Sawyer; Raymond W Bourdeau; Mikhail G Shapiro
Journal:  Science       Date:  2019-09-27       Impact factor: 47.728

Review 6.  Achieving Spatial and Molecular Specificity with Ultrasound-Targeted Biomolecular Nanotherapeutics.

Authors:  Jerzy O Szablowski; Avinoam Bar-Zion; Mikhail G Shapiro
Journal:  Acc Chem Res       Date:  2019-08-09       Impact factor: 22.384

Review 7.  Ultrasound-Responsive Systems as Components for Smart Materials.

Authors:  Athanasios G Athanassiadis; Zhichao Ma; Nicolas Moreno-Gomez; Kai Melde; Eunjin Choi; Rahul Goyal; Peer Fischer
Journal:  Chem Rev       Date:  2021-11-12       Impact factor: 60.622

8.  Sonoporation: Past, Present, and Future.

Authors:  Joseph Rich; Zhenhua Tian; Tony Jun Huang
Journal:  Adv Mater Technol       Date:  2021-09-14

9.  Nonlinear X-wave ultrasound imaging of acoustic biomolecules.

Authors:  David Maresca; Daniel P Sawyer; Guillaume Renaud; Audrey Lee-Gosselin; Mikhail G Shapiro
Journal:  Phys Rev X       Date:  2018-10-04       Impact factor: 15.762

Review 10.  Genetically encodable materials for non-invasive biological imaging.

Authors:  Arash Farhadi; Felix Sigmund; Gil Gregor Westmeyer; Mikhail G Shapiro
Journal:  Nat Mater       Date:  2021-02-01       Impact factor: 43.841

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