Literature DB >> 33526879

Genetically encodable materials for non-invasive biological imaging.

Arash Farhadi1,2, Felix Sigmund3,4, Gil Gregor Westmeyer5,6, Mikhail G Shapiro7.   

Abstract

Many questions in basic biology and medicine require the ability to visualize the function of specific cells and molecules inside living organisms. In this context, technologies such as ultrasound, optoacoustics and magnetic resonance provide non-invasive imaging access to deep-tissue regions, as used in many laboratories and clinics to visualize anatomy and physiology. In addition, recent work has enabled these technologies to image the location and function of specific cells and molecules inside the body by coupling the physics of sound waves, nuclear spins and light absorption to unique protein-based materials. These materials, which include air-filled gas vesicles, capsid-like nanocompartments, pigment-producing enzymes and transmembrane transporters, enable new forms of biomolecular and cellular contrast. The ability of these protein-based contrast agents to be genetically encoded and produced by cells creates opportunities for unprecedented in vivo studies of cellular function, while their amenability to genetic engineering enables atomic-level design of their physical, chemical and biological properties.

Entities:  

Year:  2021        PMID: 33526879      PMCID: PMC8606175          DOI: 10.1038/s41563-020-00883-3

Source DB:  PubMed          Journal:  Nat Mater        ISSN: 1476-1122            Impact factor:   43.841


  78 in total

1.  Ultrafast ultrasound localization microscopy for deep super-resolution vascular imaging.

Authors:  Claudia Errico; Juliette Pierre; Sophie Pezet; Yann Desailly; Zsolt Lenkei; Olivier Couture; Mickael Tanter
Journal:  Nature       Date:  2015-11-26       Impact factor: 49.962

Review 2.  The coming of age of de novo protein design.

Authors:  Po-Ssu Huang; Scott E Boyken; David Baker
Journal:  Nature       Date:  2016-09-15       Impact factor: 49.962

3.  A Genetically Encoded β-Lactamase Reporter for Ultrasensitive (129) Xe NMR in Mammalian Cells.

Authors:  Yanfei Wang; Benjamin W Roose; Eugene J Palovcak; Vincenzo Carnevale; Ivan J Dmochowski
Journal:  Angew Chem Int Ed Engl       Date:  2016-06-15       Impact factor: 15.336

4.  Acoustic Behavior of Halobacterium salinarum Gas Vesicles in the High-Frequency Range: Experiments and Modeling.

Authors:  Emmanuel Cherin; Johan M Melis; Raymond W Bourdeau; Melissa Yin; Dennis M Kochmann; F Stuart Foster; Mikhail G Shapiro
Journal:  Ultrasound Med Biol       Date:  2017-03-01       Impact factor: 2.998

5.  Vaccinia virus-mediated melanin production allows MR and optoacoustic deep tissue imaging and laser-induced thermotherapy of cancer.

Authors:  Jochen Stritzker; Lorenz Kirscher; Miriam Scadeng; Nikolaos C Deliolanis; Stefan Morscher; Panagiotis Symvoulidis; Karin Schaefer; Qian Zhang; Lisa Buckel; Michael Hess; Ulrike Donat; William G Bradley; Vasilis Ntziachristos; Aladar A Szalay
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-11       Impact factor: 11.205

Review 6.  Probing and engineering liquid-phase organelles.

Authors:  Dan Bracha; Mackenzie T Walls; Clifford P Brangwynne
Journal:  Nat Biotechnol       Date:  2019-12-02       Impact factor: 54.908

7.  Violacein as a genetically-controlled, enzymatically amplified and photobleaching-resistant chromophore for optoacoustic bacterial imaging.

Authors:  Yuanyuan Jiang; Felix Sigmund; Josefine Reber; Xosé Luís Deán-Ben; Sarah Glasl; Moritz Kneipp; Héctor Estrada; Daniel Razansky; Vasilis Ntziachristos; Gil G Westmeyer
Journal:  Sci Rep       Date:  2015-06-19       Impact factor: 4.379

Review 8.  Cellular incorporation of unnatural amino acids and bioorthogonal labeling of proteins.

Authors:  Kathrin Lang; Jason W Chin
Journal:  Chem Rev       Date:  2014-03-21       Impact factor: 60.622

9.  MRI measurements of reporter-mediated increases in transmembrane water exchange enable detection of a gene reporter.

Authors:  Franz Schilling; Susana Ros; De-En Hu; Paula D'Santos; Sarah McGuire; Richard Mair; Alan J Wright; Elizabeth Mannion; Robin J M Franklin; André A Neves; Kevin M Brindle
Journal:  Nat Biotechnol       Date:  2016-12-05       Impact factor: 54.908

10.  Structural characterization of encapsulated ferritin provides insight into iron storage in bacterial nanocompartments.

Authors:  Didi He; Sam Hughes; Sally Vanden-Hehir; Atanas Georgiev; Kirsten Altenbach; Emma Tarrant; C Logan Mackay; Kevin J Waldron; David J Clarke; Jon Marles-Wright
Journal:  Elife       Date:  2016-08-16       Impact factor: 8.140

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  5 in total

Review 1.  Molecular fMRI of neurochemical signaling.

Authors:  He Wei; Abigail M Frey; Alan Jasanoff
Journal:  J Neurosci Methods       Date:  2021-09-29       Impact factor: 2.390

2.  Label-free concurrent 5-modal microscopy (Co5M) resolves unknown spatio-temporal processes in wound healing.

Authors:  Markus Seeger; Christoph Dehner; Dominik Jüstel; Vasilis Ntziachristos
Journal:  Commun Biol       Date:  2021-09-06

3.  Versioning biological cells for trustworthy cell engineering.

Authors:  Jonathan Tellechea-Luzardo; Leanne Hobbs; Elena Velázquez; Lenka Pelechova; Simon Woods; Víctor de Lorenzo; Natalio Krasnogor
Journal:  Nat Commun       Date:  2022-02-09       Impact factor: 17.694

Review 4.  Reporter Genes for Brain Imaging Using MRI, SPECT and PET.

Authors:  Tianxin Gao; Pei Wang; Teng Gong; Ying Zhou; Ancong Wang; Xiaoying Tang; Xiaolei Song; Yingwei Fan
Journal:  Int J Mol Sci       Date:  2022-07-30       Impact factor: 6.208

5.  Genetically Encoded Self-Assembling Iron Oxide Nanoparticles as a Possible Platform for Cancer-Cell Tracking.

Authors:  Maria V Efremova; Silviu-Vasile Bodea; Felix Sigmund; Alevtina Semkina; Gil G Westmeyer; Maxim A Abakumov
Journal:  Pharmaceutics       Date:  2021-03-16       Impact factor: 6.321

  5 in total

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