Literature DB >> 29578681

Solid-Phase Synthesis of β-Hydroxy Ketones Via DNA-Compatible Organocatalytic Aldol Reactions.

Keitou Shu1,2, Thomas Kodadek1.   

Abstract

One-bead one-compound (OBOC) libraries constructed by solid-phase split-and-pool synthesis are a valuable source of protein ligands. Most OBOC libraries are composed of oligoamides, particularly peptides, peptoids, and peptoid-inspired molecules. Further diversification of the chemical space covered by OBOC libraries is desirable. Toward this end, we report here that the proline-catalyzed asymmetric aldol reaction, developed by List and Barbas for solution-phase synthesis, also works well for coupling immobilized aldehydes and soluble ketones. These reaction conditions do not compromise the amplification of DNA by the polymerase chain reaction. Thus, this chemistry should be useful for the construction of novel DNA-encoded OBOC libraries by solid-phase synthesis.

Entities:  

Keywords:  Aldol reaction; DNA-encoded libraries; one-bead one-compound libraries; organocatalysis; solid-phase synthesis

Mesh:

Substances:

Year:  2018        PMID: 29578681      PMCID: PMC6826340          DOI: 10.1021/acscombsci.8b00001

Source DB:  PubMed          Journal:  ACS Comb Sci        ISSN: 2156-8944            Impact factor:   3.784


  35 in total

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Journal:  J Am Chem Soc       Date:  2002-07-03       Impact factor: 15.419

2.  Direct organocatalytic aldol reactions in buffered aqueous media.

Authors:  Armando Córdova; Wolfgang Notz; Carlos F Barbas
Journal:  Chem Commun (Camb)       Date:  2002-12-21       Impact factor: 6.222

3.  Quantum dots as a visual aid for screening bead-bound combinatorial libraries.

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Journal:  Chembiochem       Date:  2003-11-07       Impact factor: 3.164

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Authors:  Timothy J Ritchie; Simon J F Macdonald
Journal:  Drug Discov Today       Date:  2009-09-01       Impact factor: 7.851

5.  A One-Bead One-Peptide Combinatorial Library Method for B-Cell Epitope Mapping

Authors: 
Journal:  Methods       Date:  1996-06       Impact factor: 3.608

6.  Screening bicyclic peptide libraries for protein-protein interaction inhibitors: discovery of a tumor necrosis factor-α antagonist.

Authors:  Wenlong Lian; Punit Upadhyaya; Curran A Rhodes; Yusen Liu; Dehua Pei
Journal:  J Am Chem Soc       Date:  2013-08-01       Impact factor: 15.419

7.  Escape from flatland: increasing saturation as an approach to improving clinical success.

Authors:  Frank Lovering; Jack Bikker; Christine Humblet
Journal:  J Med Chem       Date:  2009-11-12       Impact factor: 7.446

8.  High-throughput sequencing of peptoids and peptide-peptoid hybrids by partial edman degradation and mass spectrometry.

Authors:  Amit Thakkar; Allison S Cohen; Michael D Connolly; Ronald N Zuckermann; Dehua Pei
Journal:  J Comb Chem       Date:  2009-03-09

9.  DNA-Encoded Solid-Phase Synthesis: Encoding Language Design and Complex Oligomer Library Synthesis.

Authors:  Andrew B MacConnell; Patrick J McEnaney; Valerie J Cavett; Brian M Paegel
Journal:  ACS Comb Sci       Date:  2015-09-05       Impact factor: 3.784

10.  Utility of redundant combinatorial libraries in distinguishing high and low quality screening hits.

Authors:  Todd M Doran; Yu Gao; Kimberly Mendes; Sonja Dean; Scott Simanski; Thomas Kodadek
Journal:  ACS Comb Sci       Date:  2014-04-21       Impact factor: 3.784

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  4 in total

Review 1.  Chemical composition of DNA-encoded libraries, past present and future.

Authors:  Paige Dickson; Thomas Kodadek
Journal:  Org Biomol Chem       Date:  2019-05-15       Impact factor: 3.876

2.  Solid-phase synthesis of DNA-encoded libraries via an "aldehyde explosion" strategy.

Authors:  Nicholas G Paciaroni; John M Ndungu; Thomas Kodadek
Journal:  Chem Commun (Camb)       Date:  2020-03-26       Impact factor: 6.222

Review 3.  DNA-Encoded Chemistry: Drug Discovery from a Few Good Reactions.

Authors:  Patrick R Fitzgerald; Brian M Paegel
Journal:  Chem Rev       Date:  2020-10-12       Impact factor: 72.087

Review 4.  DNA-encoded libraries (DELs): a review of on-DNA chemistries and their output.

Authors:  Ying Shi; Yan-Ran Wu; Jian-Qiang Yu; Wan-Nian Zhang; Chun-Lin Zhuang
Journal:  RSC Adv       Date:  2021-01-19       Impact factor: 3.361

  4 in total

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