Literature DB >> 29525930

Exploring the Issues Surrounding Clinical Exome Sequencing in the Prenatal Setting.

Swetha Narayanan1, Bruce Blumberg2, Marla L Clayman3, Vivian Pan4, Catherine Wicklund5.   

Abstract

Exome sequencing is a clinical diagnostic test offered primarily for children and adults with suspected genetic conditions. The purpose of this study was to explore issues related to exome sequencing in a reproductive clinical setting. This was a qualitative study using semi-structured interviews. Participants were professionals drawn from four key stakeholder groups-healthcare providers, laboratory/industry, ethics, and government. Transcribed interviews were analyzed for emergent themes. Most participants saw potential clinical utility in offering prenatal exome sequencing for diagnostic purposes as opposed to screening. Participants expressed similar challenges already encountered with using exome sequencing in a pediatric setting, such as difficulty interpreting results and voiced many of the same concerns posed by prenatal testing, such as adequate pretest counseling. While previously reported issues and challenges were mentioned, participants agreed those difficulties are anticipated to be much greater with prenatal exome sequencing because of the scope of testing and the option for pregnancy decision-making. The results of this study help gain a better understanding of the implications of using exome sequencing in a prenatal setting. Development of guidelines is also warranted to aid clinical practice and laboratory standards for reporting prenatal results.

Entities:  

Keywords:  Clinical; Exome sequencing; Prenatal; Qualitative; WES

Mesh:

Year:  2018        PMID: 29525930     DOI: 10.1007/s10897-018-0245-5

Source DB:  PubMed          Journal:  J Genet Couns        ISSN: 1059-7700            Impact factor:   2.537


  42 in total

1.  Prenatal exome sequencing for fetuses with structural abnormalities: the next step.

Authors:  S C Hillman; D Willams; K J Carss; D J McMullan; M E Hurles; M D Kilby
Journal:  Ultrasound Obstet Gynecol       Date:  2014-12-09       Impact factor: 7.299

2.  Prenatal whole-genome sequencing--is the quest to know a fetus's future ethical?

Authors:  Ilana R Yurkiewicz; Bruce R Korf; Lisa Soleymani Lehmann
Journal:  N Engl J Med       Date:  2014-01-16       Impact factor: 91.245

3.  Parental experiences of prenatal whole exome sequencing (WES) in cases of ultrasound diagnosed fetal structural anomaly.

Authors:  Elizabeth Quinlan-Jones; Sarah C Hillman; Mark D Kilby; Sheila M Greenfield
Journal:  Prenat Diagn       Date:  2017-11-10       Impact factor: 3.050

4.  Prenatal whole exome sequencing: the views of clinicians, scientists, genetic counsellors and patient representatives.

Authors:  Elizabeth Quinlan-Jones; Mark D Kilby; Sheila Greenfield; Michael Parker; Dominic McMullan; Matthew E Hurles; Sarah C Hillman
Journal:  Prenat Diagn       Date:  2016-09-18       Impact factor: 3.050

5.  Stakeholders' opinions on the implementation of pediatric whole exome sequencing: implications for informed consent.

Authors:  Brooke L Levenseller; Danielle J Soucier; Victoria A Miller; Diana Harris; Laura Conway; Barbara A Bernhardt
Journal:  J Genet Couns       Date:  2013-07-12       Impact factor: 2.537

6.  Recommendations for reporting of secondary findings in clinical exome and genome sequencing, 2016 update (ACMG SF v2.0): a policy statement of the American College of Medical Genetics and Genomics.

Authors:  Sarah S Kalia; Kathy Adelman; Sherri J Bale; Wendy K Chung; Christine Eng; James P Evans; Gail E Herman; Sophia B Hufnagel; Teri E Klein; Bruce R Korf; Kent D McKelvey; Kelly E Ormond; C Sue Richards; Christopher N Vlangos; Michael Watson; Christa L Martin; David T Miller
Journal:  Genet Med       Date:  2016-11-17       Impact factor: 8.822

7.  Clinical whole-exome sequencing: are we there yet?

Authors:  Paldeep Singh Atwal; Marie-Louise Brennan; Rachel Cox; Michael Niaki; Julia Platt; Margaret Homeyer; Andrea Kwan; Sylvie Parkin; Susan Schelley; Leah Slattery; Yael Wilnai; Jonathan Adam Bernstein; Gregory M Enns; Louanne Hudgins
Journal:  Genet Med       Date:  2014-02-13       Impact factor: 8.822

8.  The usefulness of whole-exome sequencing in routine clinical practice.

Authors:  Alejandro Iglesias; Kwame Anyane-Yeboa; Julia Wynn; Ashley Wilson; Megan Truitt Cho; Edwin Guzman; Rebecca Sisson; Claire Egan; Wendy K Chung
Journal:  Genet Med       Date:  2014-06-05       Impact factor: 8.822

9.  First applications of a targeted exome sequencing approach in fetuses with ultrasound abnormalities reveals an important fraction of cases with associated gene defects.

Authors:  Constantinos Pangalos; Birgitta Hagnefelt; Konstantinos Lilakos; Christopher Konialis
Journal:  PeerJ       Date:  2016-04-26       Impact factor: 2.984

10.  Exome sequencing improves genetic diagnosis of structural fetal abnormalities revealed by ultrasound.

Authors:  Keren J Carss; Sarah C Hillman; Vijaya Parthiban; Dominic J McMullan; Eamonn R Maher; Mark D Kilby; Matthew E Hurles
Journal:  Hum Mol Genet       Date:  2014-01-29       Impact factor: 6.150

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  8 in total

1.  The fetus in the age of the genome.

Authors:  Dagmar Schmitz; Wolfram Henn
Journal:  Hum Genet       Date:  2021-08-23       Impact factor: 5.881

Review 2.  Application of exome sequencing for prenatal diagnosis: a rapid scoping review.

Authors:  Misty Pratt; Chantelle Garritty; Micere Thuku; Leila Esmaeilisaraji; Candyce Hamel; Taila Hartley; Kathryn Millar; Becky Skidmore; Shelley Dougan; Christine M Armour
Journal:  Genet Med       Date:  2020-08-04       Impact factor: 8.822

3.  Beyond diagnostic yield: prenatal exome sequencing results in maternal, neonatal, and familial clinical management changes.

Authors:  Leandra K Tolusso; Paige Hazelton; Beatrix Wong; Daniel T Swarr
Journal:  Genet Med       Date:  2021-01-13       Impact factor: 8.822

Review 4.  Prenatal Exome Sequencing: Background, Current Practice and Future Perspectives-A Systematic Review.

Authors:  Daniele Guadagnolo; Gioia Mastromoro; Francesca Di Palma; Antonio Pizzuti; Enrica Marchionni
Journal:  Diagnostics (Basel)       Date:  2021-02-02

5.  Implementing a rapid fetal exome sequencing service: What do parents and health professionals think?

Authors:  Rhiannon Mellis; Dagmar Tapon; Nora Shannon; Esther Dempsey; Pranav Pandya; Lyn S Chitty; Melissa Hill
Journal:  Prenat Diagn       Date:  2022-04-14       Impact factor: 3.242

6.  Parental Hopes and Understandings of the Value of Prenatal Diagnostic Genomic Sequencing: A Qualitative Analysis.

Authors:  Simon M Outram; Julia E H Brown; Astrid N Zamora; Nuriye Sahin-Hodoglugil; Sara L Ackerman
Journal:  Front Genet       Date:  2022-07-18       Impact factor: 4.772

7.  What's out there for parents? A systematic review of online information about prenatal microarray and exome sequencing.

Authors:  Michelle Peter; Hannah McInnes-Dean; Jane Fisher; Dagmar Tapon; Lyn S Chitty; Melissa Hill
Journal:  Prenat Diagn       Date:  2021-11-07       Impact factor: 3.242

8.  Dealing with uncertain results from chromosomal microarray and exome sequencing in the prenatal setting: An international cross-sectional study with healthcare professionals.

Authors:  Celine Lewis; Jennifer Hammond; Jasmijn E Klapwijk; Eleanor Harding; Stina Lou; Ida Vogel; Emma J Szepe; Lisa Hui; Charlotta Ingvoldstad-Malmgren; Maria J Soller; Kelly E Ormond; Mahesh Choolani; Melissa Hill; Sam Riedijk
Journal:  Prenat Diagn       Date:  2021-03-30       Impact factor: 3.050

  8 in total

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