Literature DB >> 29502224

Detection of side-chain proton resonances of fully protonated biosolids in nano-litre volumes by magic angle spinning solid-state NMR.

James Tolchard1, Manoj Kumar Pandey2,3,4, Mélanie Berbon1, Abdelmajid Noubhani1, Sven J Saupe5, Yusuke Nishiyama6,7, Birgit Habenstein8, Antoine Loquet9.   

Abstract

We present a new solid-state NMR proton-detected three-dimensional experiment dedicated to the observation of protein proton side chain resonances in nano-liter volumes. The experiment takes advantage of very fast magic angle spinning and double quantum 13C-13C transfer to establish efficient (H)CCH correlations detected on side chain protons. Our approach is demonstrated on the HET-s prion domain in its functional amyloid fibrillar form, fully protonated, with a sample amount of less than 500 µg using a MAS frequency of 70 kHz. The majority of aliphatic and aromatic side chain protons (70%) are observable, in addition to Hα resonances, in a single experiment providing a complementary approach to the established proton-detected amide-based multidimensional solid-state NMR experiments for the study and resonance assignment of biosolid samples, in particular for aromatic side chain resonances.

Entities:  

Keywords:  Amyloid fibrils; Protein NMR; Proton detection; Solid-state NMR; Very fast MAS

Mesh:

Substances:

Year:  2018        PMID: 29502224     DOI: 10.1007/s10858-018-0168-3

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  62 in total

1.  Determination of multiple ***φ***-torsion angles in proteins by selective and extensive (13)C labeling and two-dimensional solid-state NMR.

Authors:  M Hong
Journal:  J Magn Reson       Date:  1999-08       Impact factor: 2.229

2.  Sensitive high resolution inverse detection NMR spectroscopy of proteins in the solid state.

Authors:  Eric K Paulson; Corey R Morcombe; Vadim Gaponenko; Barbara Dancheck; R Andrew Byrd; Kurt W Zilm
Journal:  J Am Chem Soc       Date:  2003-12-24       Impact factor: 15.419

3.  Access to side-chain carbon information in deuterated solids under fast MAS through non-rotor-synchronized mixing.

Authors:  Natalia Kulminskaya; Suresh Kumar Vasa; Karin Giller; Stefan Becker; Ann Kwan; Margaret Sunde; Rasmus Linser
Journal:  Chem Commun (Camb)       Date:  2015-11-06       Impact factor: 6.222

4.  Solid-state protein-structure determination with proton-detected triple-resonance 3D magic-angle-spinning NMR spectroscopy.

Authors:  Donghua H Zhou; John J Shea; Andrew J Nieuwkoop; W Trent Franks; Benjamin J Wylie; Charles Mullen; Dennis Sandoz; Chad M Rienstra
Journal:  Angew Chem Int Ed Engl       Date:  2007       Impact factor: 15.336

5.  A proton-detected 4D solid-state NMR experiment for protein structure determination.

Authors:  Matthias Huber; Sebastian Hiller; Paul Schanda; Matthias Ernst; Anja Böckmann; René Verel; Beat H Meier
Journal:  Chemphyschem       Date:  2011-02-15       Impact factor: 3.102

Review 6.  Advanced solid-state NMR approaches for structure determination of membrane proteins and amyloid fibrils.

Authors:  Ming Tang; Gemma Comellas; Chad M Rienstra
Journal:  Acc Chem Res       Date:  2013-05-10       Impact factor: 22.384

Review 7.  Molecular Structure of Aggregated Amyloid-β: Insights from Solid-State Nuclear Magnetic Resonance.

Authors:  Robert Tycko
Journal:  Cold Spring Harb Perspect Med       Date:  2016-08-01       Impact factor: 6.915

Review 8.  Emerging Structural Understanding of Amyloid Fibrils by Solid-State NMR.

Authors:  Beat H Meier; Roland Riek; Anja Böckmann
Journal:  Trends Biochem Sci       Date:  2017-09-12       Impact factor: 13.807

9.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

10.  Limits of Resolution and Sensitivity of Proton Detected MAS Solid-State NMR Experiments at 111 kHz in Deuterated and Protonated Proteins.

Authors:  Kai Xue; Riddhiman Sarkar; Carina Motz; Sam Asami; Diana C Rodriguez Camargo; Venita Decker; Sebastian Wegner; Zdenek Tosner; Bernd Reif
Journal:  Sci Rep       Date:  2017-08-07       Impact factor: 4.379

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  2 in total

1.  Two decades of progress in structural and dynamic studies of amyloids by solid-state NMR.

Authors:  Christopher P Jaroniec
Journal:  J Magn Reson       Date:  2019-07-09       Impact factor: 2.229

2.  Design Parameters of Tissue-Engineering Scaffolds at the Atomic Scale.

Authors:  Shehrazade Jekhmane; Marek Prachar; Raffaele Pugliese; Federico Fontana; João Medeiros-Silva; Fabrizio Gelain; Markus Weingarth
Journal:  Angew Chem Int Ed Engl       Date:  2019-10-30       Impact factor: 15.336

  2 in total

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