Literature DB >> 29486979

Unravelling the Mechanisms of RNA Helicase Regulation.

Katherine E Sloan1, Markus T Bohnsack2.   

Abstract

RNA helicases are critical regulators at the nexus of multiple pathways of RNA metabolism, and in the complex cellular environment, tight spatial and temporal regulation of their activity is essential. Dedicated protein cofactors play key roles in recruiting helicases to specific substrates and modulating their catalytic activity. Alongside individual RNA helicase cofactors, networks of cofactors containing evolutionarily conserved domains such as the G-patch and MIF4G domains highlight the potential for cross-regulation of different aspects of gene expression. Structural analyses of RNA helicase-cofactor complexes now provide insight into the diverse mechanisms by which cofactors can elicit specific and coordinated regulation of RNA helicase action. Furthermore, post-translational modifications (PTMs) and long non-coding RNA (lncRNA) regulators have recently emerged as novel modes of RNA helicase regulation.
Copyright © 2018 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  RNA helicase; RNA structure; gene expression; post-translational modification; protein cofactor; ribonucleoprotein complex

Mesh:

Substances:

Year:  2018        PMID: 29486979     DOI: 10.1016/j.tibs.2018.02.001

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  39 in total

1.  RNA helicase-mediated regulation of snoRNP dynamics on pre-ribosomes and rRNA 2'-O-methylation.

Authors:  Gerald Ryan R Aquino; Nicolai Krogh; Philipp Hackert; Roman Martin; Jimena Davila Gallesio; Robert W van Nues; Claudia Schneider; Nicholas J Watkins; Henrik Nielsen; Katherine E Bohnsack; Markus T Bohnsack
Journal:  Nucleic Acids Res       Date:  2021-04-19       Impact factor: 16.971

Review 2.  The Structure of the Nuclear Pore Complex (An Update).

Authors:  Daniel H Lin; André Hoelz
Journal:  Annu Rev Biochem       Date:  2019-03-18       Impact factor: 23.643

3.  The G-patch activators Pfa1 and PINX1 exhibit different modes of interaction with the Prp43 RNA helicase.

Authors:  Saïda Mouffok; Régine Capeyrou; Kamila Belhabich-Baumas; Clément Joret; Anthony K Henras; Odile Humbert; Yves Henry
Journal:  RNA Biol       Date:  2020-10-30       Impact factor: 4.652

Review 4.  DEAH-Box RNA Helicases in Pre-mRNA Splicing.

Authors:  Francesca De Bortoli; Sara Espinosa; Rui Zhao
Journal:  Trends Biochem Sci       Date:  2020-11-30       Impact factor: 13.807

5.  The RNA Helicase DDX6 Controls Cellular Plasticity by Modulating P-Body Homeostasis.

Authors:  Bruno Di Stefano; En-Ching Luo; Chuck Haggerty; Stefan Aigner; Jocelyn Charlton; Justin Brumbaugh; Fei Ji; Inés Rabano Jiménez; Katie J Clowers; Aaron J Huebner; Kendell Clement; Inna Lipchina; Marit A C de Kort; Anthony Anselmo; John Pulice; Mattia F M Gerli; Hongcang Gu; Steven P Gygi; Ruslan I Sadreyev; Alexander Meissner; Gene W Yeo; Konrad Hochedlinger
Journal:  Cell Stem Cell       Date:  2019-10-03       Impact factor: 24.633

Review 6.  Ribosome assembly coming into focus.

Authors:  Sebastian Klinge; John L Woolford
Journal:  Nat Rev Mol Cell Biol       Date:  2019-02       Impact factor: 94.444

7.  Gain-of-function mutagenesis through activation tagging identifies XPB2 and SEN1 helicase genes as potential targets for drought stress tolerance in rice.

Authors:  Mouboni Dutta; Mazahar Moin; Anusree Saha; Dibyendu Dutta; Achala Bakshi; P B Kirti
Journal:  Theor Appl Genet       Date:  2021-04-05       Impact factor: 5.699

8.  Identifying RNA Helicase Inhibitors Using Duplex Unwinding Assays.

Authors:  John C Marecki; Alicia K Byrd; Kevin D Raney
Journal:  Methods Mol Biol       Date:  2021

9.  Identification of Intrinsic RNA Binding Specificity of Purified Proteins by in vitro RNA Immunoprecipitation (vitRIP).

Authors:  Marisa Müller; Tamas Schauer; Peter B Becker
Journal:  Bio Protoc       Date:  2021-03-05

10.  The DExD box ATPase DDX55 is recruited to domain IV of the 28S ribosomal RNA by its C-terminal region.

Authors:  Priyanka Choudhury; Jens Kretschmer; Philipp Hackert; Katherine E Bohnsack; Markus T Bohnsack
Journal:  RNA Biol       Date:  2020-10-13       Impact factor: 4.652

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