Literature DB >> 29485214

Transcription Factor-Based Biosensors in High-Throughput Screening: Advances and Applications.

Feng Cheng1, Xiao-Ling Tang1, Tsvetan Kardashliev2.   

Abstract

The molecular mechanisms that cells use to sense changes in the intra- and extracellular environment are increasingly utilized in synthetic biology to build genetic reporter constructs for various applications. Although in nature sensing can be RNA-mediated, most existing genetically-encoded biosensors are based on transcription factors (TF) and cognate DNA sequences. Here, the recent advances in the integration of TF-based biosensors in metabolic and protein engineering screens whereas distinction is made between production-driven and competitive screening systems for enzyme evolution under physiological conditions are discussed. Furthermore, the advantages and disadvantages of existing TF-based biosensors are examined with respects to dynamic range, sensitivity, and robustness, and compared to other screening approaches. The application examples discussed in this review demonstrate the promising potential TF-based biosensors hold as screening tools in laboratory evolution of proteins and metabolic pathways, alike.
© 2018 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Keywords:  Biosensors; Enzyme engineering; High-throughput screening; Strain evolution; Transcription factor

Mesh:

Substances:

Year:  2018        PMID: 29485214     DOI: 10.1002/biot.201700648

Source DB:  PubMed          Journal:  Biotechnol J        ISSN: 1860-6768            Impact factor:   4.677


  15 in total

1.  A light-controlled cell lysis system in bacteria.

Authors:  Geyi Wang; Xin Lu; Yisha Zhu; Wei Zhang; Jiahui Liu; Yankang Wu; Liyang Yu; Dongchang Sun; Feng Cheng
Journal:  J Ind Microbiol Biotechnol       Date:  2018-05-08       Impact factor: 3.346

2.  Directed evolution of the PobR allosteric transcription factor to generate a biosensor for 4-hydroxymandelic acid.

Authors:  YaoYao Liang; Juan Luo; Chenhao Yang; Shuning Guo; Bowen Zhang; Fengqianrui Chen; Kairui Su; Yulong Zhang; Yi Dong; Zhihao Wang; Hongda Fu; Guangchao Sui; Pengchao Wang
Journal:  World J Microbiol Biotechnol       Date:  2022-05-03       Impact factor: 3.312

3.  Development of a whole-cell biosensor for detection of antibiotics targeting bacterial cell envelope in Bacillus subtilis.

Authors:  Jianhua Yin; Dan Cheng; Yiling Zhu; Yanqun Liang; Zhiliang Yu
Journal:  Appl Microbiol Biotechnol       Date:  2022-01-11       Impact factor: 4.813

4.  Saccharomyces cerevisiae as a Heterologous Host for Natural Products.

Authors:  Maximilian Otto; Dany Liu; Verena Siewers
Journal:  Methods Mol Biol       Date:  2022

Review 5.  Protein engineering for natural product biosynthesis and synthetic biology applications.

Authors:  Miles A Calzini; Alexandra A Malico; Melissa M Mitchler; Gavin J Williams
Journal:  Protein Eng Des Sel       Date:  2021-02-15       Impact factor: 1.952

Review 6.  Transcription factor-based biosensors: a molecular-guided approach for natural product engineering.

Authors:  Melissa M Mitchler; Jessie M Garcia; Nichole E Montero; Gavin J Williams
Journal:  Curr Opin Biotechnol       Date:  2021-01-23       Impact factor: 10.279

7.  The physical basis and practical consequences of biological promiscuity.

Authors:  Shelley D Copley
Journal:  Phys Biol       Date:  2020-04-03       Impact factor: 2.959

8.  Extended Metabolic Biosensor Design for Dynamic Pathway Regulation of Cell Factories.

Authors:  Yadira Boada; Alejandro Vignoni; Jesús Picó; Pablo Carbonell
Journal:  iScience       Date:  2020-06-23

9.  Real Time Monitoring of NADPH Concentrations in Corynebacterium glutamicum and Escherichia coli via the Genetically Encoded Sensor mBFP.

Authors:  Oliver Goldbeck; Alexander W Eck; Gerd M Seibold
Journal:  Front Microbiol       Date:  2018-10-24       Impact factor: 5.640

10.  Development of a Metabolite Sensor for High-Throughput Detection of Aldehydes in Escherichia Coli.

Authors:  Cláudio R Frazão; Victor Maton; Jean M François; Thomas Walther
Journal:  Front Bioeng Biotechnol       Date:  2018-08-23
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