Literature DB >> 35501522

Directed evolution of the PobR allosteric transcription factor to generate a biosensor for 4-hydroxymandelic acid.

YaoYao Liang1,2,3, Juan Luo1,2, Chenhao Yang4,2, Shuning Guo4,2, Bowen Zhang1,2, Fengqianrui Chen4,2, Kairui Su1,2, Yulong Zhang1,2, Yi Dong4,2, Zhihao Wang4,2, Hongda Fu2, Guangchao Sui5,6,7,8, Pengchao Wang9,10,11,12,13.   

Abstract

Hydroxy-mandelic acid (HMA) is widely applied in pharmaceuticals, food and cosmetics. In this study, we aimed to develop an allosteric transcription factors (aTFs) based biosensor for HMA. PobR, an aTF for HMA analog 4-hydroxybenzoic acid, was used to alter its selectivity and create novel aTFs responsive to HMA by directed evolution. We established a PobR mutant library with a capacity of 550,000 mutants using error-prone PCR and Megawhop PCR. Through our screening, two mutants were obtained with responsiveness to HMA. Analysis of each missense mutation indicating residues 122-126 were involved in its PobR ligand specificity. These results showed the effectiveness of directed evolution in switching the ligand specificity of a biosensor and improving HMA production.
© 2022. The Author(s), under exclusive licence to Springer Nature B.V.

Entities:  

Keywords:  Directed evolution; Hydroxy-mandelic acid; Ligand specificity; PobR

Mesh:

Substances:

Year:  2022        PMID: 35501522     DOI: 10.1007/s11274-022-03286-5

Source DB:  PubMed          Journal:  World J Microbiol Biotechnol        ISSN: 0959-3993            Impact factor:   3.312


  5 in total

1.  AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading.

Authors:  Oleg Trott; Arthur J Olson
Journal:  J Comput Chem       Date:  2010-01-30       Impact factor: 3.376

2.  Probing water micro-solvation in proteins by water catalysed proton-transfer tautomerism.

Authors:  Jiun-Yi Shen; Wei-Chih Chao; Chun Liu; Hsiao-An Pan; Hsiao-Ching Yang; Chi-Lin Chen; Yi-Kang Lan; Li-Ju Lin; Jinn-Shyan Wang; Jyh-Feng Lu; Steven Chun-Wei Chou; Kuo-Chun Tang; Pi-Tai Chou
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

Review 3.  Transcription Factor-Based Biosensors in High-Throughput Screening: Advances and Applications.

Authors:  Feng Cheng; Xiao-Ling Tang; Tsvetan Kardashliev
Journal:  Biotechnol J       Date:  2018-03-23       Impact factor: 4.677

4.  Biosensor-Enabled Directed Evolution to Improve Muconic Acid Production in Saccharomyces cerevisiae.

Authors:  John M Leavitt; James M Wagner; Cuong C Tu; Alice Tong; Yanyi Liu; Hal S Alper
Journal:  Biotechnol J       Date:  2017-08-24       Impact factor: 4.677

5.  Directed evolution of a transcription factor PbrR to improve lead selectivity and reduce zinc interference through dual selection.

Authors:  Xiaoqiang Jia; Yubing Ma; Rongrong Bu; Tingting Zhao; Kang Wu
Journal:  AMB Express       Date:  2020-04-10       Impact factor: 3.298

  5 in total

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