Literature DB >> 29453268

High Microbial Diversity Promotes Soil Ecosystem Functioning.

Pierre-Alain Maron1, Amadou Sarr2, Aurore Kaisermann2, Jean Lévêque3, Olivier Mathieu3, Julien Guigue3, Battle Karimi2, Laetitia Bernard4, Samuel Dequiedt2, Sébastien Terrat2, Abad Chabbi5, Lionel Ranjard2.   

Abstract

In soil, the link between microbial diversity and carbon transformations is challenged by the concept of functional redundancy. Here, we hypothesized that functional redundancy may decrease with increasing carbon source recalcitrance and that coupling of diversity with C cycling may change accordingly. We manipulated microbial diversity to examine how diversity decrease affects the decomposition of easily degradable (i.e., allochthonous plant residues) versus recalcitrant (i.e., autochthonous organic matter) C sources. We found that a decrease in microbial diversity (i) affected the decomposition of both autochthonous and allochthonous carbon sources, thereby reducing global CO2 emission by up to 40%, and (ii) shaped the source of CO2 emission toward preferential decomposition of most degradable C sources. Our results also revealed that the significance of the diversity effect increases with nutrient availability. Altogether, these findings show that C cycling in soil may be more vulnerable to microbial diversity changes than expected from previous studies, particularly in ecosystems exposed to nutrient inputs. Thus, concern about the preservation of microbial diversity may be highly relevant in the current global-change context assumed to impact soil biodiversity and the pulse inputs of plant residues and rhizodeposits into the soil.IMPORTANCE With hundreds of thousands of taxa per gram of soil, microbial diversity dominates soil biodiversity. While numerous studies have established that microbial communities respond rapidly to environmental changes, the relationship between microbial diversity and soil functioning remains controversial. Using a well-controlled laboratory approach, we provide empirical evidence that microbial diversity may be of high significance for organic matter decomposition, a major process on which rely many of the ecosystem services provided by the soil ecosystem. These new findings should be taken into account in future studies aimed at understanding and predicting the functional consequences of changes in microbial diversity on soil ecosystem services and carbon storage in soil.
Copyright © 2018 American Society for Microbiology.

Entities:  

Keywords:  carbon mineralization; functional redundancy; microbial diversity; priming effect; soil organic matter

Mesh:

Substances:

Year:  2018        PMID: 29453268      PMCID: PMC5930326          DOI: 10.1128/AEM.02738-17

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  29 in total

1.  Impact of dilution on microbial community structure and functional potential: comparison of numerical simulations and batch culture experiments.

Authors:  R B Franklin; J L Garland; C H Bolster; A L Mills
Journal:  Appl Environ Microbiol       Date:  2001-02       Impact factor: 4.792

2.  The contribution of species richness and composition to bacterial services.

Authors:  Thomas Bell; Jonathan A Newman; Bernard W Silverman; Sarah L Turner; Andrew K Lilley
Journal:  Nature       Date:  2005-08-25       Impact factor: 49.962

3.  Maintenance of soil functioning following erosion of microbial diversity.

Authors:  Sophie Wertz; Valérie Degrange; James I Prosser; Franck Poly; Claire Commeaux; Thomas Freitag; Nadine Guillaumaud; Xavier Le Roux
Journal:  Environ Microbiol       Date:  2006-12       Impact factor: 5.491

4.  Colloquium paper: resistance, resilience, and redundancy in microbial communities.

Authors:  Steven D Allison; Jennifer B H Martiny
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-11       Impact factor: 11.205

5.  Global biogeography and quantitative seasonal dynamics of Gemmatimonadetes in soil.

Authors:  Jennifer M DeBruyn; Lauren T Nixon; Mariam N Fawaz; Amy M Johnson; Mark Radosevich
Journal:  Appl Environ Microbiol       Date:  2011-07-15       Impact factor: 4.792

6.  Effects of multiple dimensions of bacterial diversity on functioning, stability and multifunctionality.

Authors:  Fabian Roger; Stefan Bertilsson; Silke Langenheder; Omneya Ahmed Osman; Lars Gamfeldt
Journal:  Ecology       Date:  2016-09-15       Impact factor: 5.499

7.  Fungal community on decomposing leaf litter undergoes rapid successional changes.

Authors:  Jana Voříšková; Petr Baldrian
Journal:  ISME J       Date:  2012-10-11       Impact factor: 10.302

8.  Demethoxylation of [O14CH3]-labelled lignin model compounds by the brown-rot fungi Gloeophyllum trabeum and Poria (Postia) placenta.

Authors:  Outi Niemenmaa; Antti Uusi-Rauva; Annele Hatakka
Journal:  Biodegradation       Date:  2007-11-01       Impact factor: 3.909

9.  Soil C and N availability determine the priming effect: microbial N mining and stoichiometric decomposition theories.

Authors:  Ruirui Chen; Mehmet Senbayram; Sergey Blagodatsky; Olga Myachina; Klaus Dittert; Xiangui Lin; Evgenia Blagodatskaya; Yakov Kuzyakov
Journal:  Glob Chang Biol       Date:  2014-04-25       Impact factor: 10.863

10.  Land Use History Shifts In Situ Fungal and Bacterial Successions following Wheat Straw Input into the Soil.

Authors:  Vincent Tardy; Abad Chabbi; Xavier Charrier; Christophe de Berranger; Tiffanie Reignier; Samuel Dequiedt; Céline Faivre-Primot; Sébastien Terrat; Lionel Ranjard; Pierre-Alain Maron
Journal:  PLoS One       Date:  2015-06-23       Impact factor: 3.240

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  35 in total

1.  Linking microbial communities to ecosystem functions: what we can learn from genotype-phenotype mapping in organisms.

Authors:  Andrew Morris; Kyle Meyer; Brendan Bohannan
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-03-23       Impact factor: 6.237

2.  Application of young maize plant residues alters the microbiome composition and its functioning in a soil under conservation agriculture: a metagenomics study.

Authors:  Mario Hernández-Guzmán; Valentín Pérez-Hernández; Selene Gómez-Acata; Norma Jiménez-Bueno; Nele Verhulst; Ligia Catalina Muñoz-Arenas; Yendi E Navarro-Noya; Marco L Luna-Guido; Luc Dendooven
Journal:  Arch Microbiol       Date:  2022-07-05       Impact factor: 2.552

Review 3.  Potential of Meta-Omics to Provide Modern Microbial Indicators for Monitoring Soil Quality and Securing Food Production.

Authors:  Christophe Djemiel; Samuel Dequiedt; Battle Karimi; Aurélien Cottin; Walid Horrigue; Arthur Bailly; Ali Boutaleb; Sophie Sadet-Bourgeteau; Pierre-Alain Maron; Nicolas Chemidlin Prévost-Bouré; Lionel Ranjard; Sébastien Terrat
Journal:  Front Microbiol       Date:  2022-06-30       Impact factor: 6.064

4.  Microbial community composition controls carbon flux across litter types in early phase of litter decomposition.

Authors:  Marie E Kroeger; M Rae DeVan; Jaron Thompson; Renee Johansen; La Verne Gallegos-Graves; Deanna Lopez; Andreas Runde; Thomas Yoshida; Brian Munsky; Sanna Sevanto; Michaeline B N Albright; John Dunbar
Journal:  Environ Microbiol       Date:  2021-08-17       Impact factor: 5.476

5.  Microbial isolates with Anti-Pseudogymnoascus destructans activities from Western Canadian bat wings.

Authors:  Adrian Forsythe; Nick Fontaine; Julianna Bissonnette; Brandon Hayashi; Chadabhorn Insuk; Soumya Ghosh; Gabrielle Kam; Aaron Wong; Cori Lausen; Jianping Xu; Naowarat Cheeptham
Journal:  Sci Rep       Date:  2022-06-14       Impact factor: 4.996

6.  Soil microbial diversity-biomass relationships are driven by soil carbon content across global biomes.

Authors:  Felipe Bastida; David J Eldridge; Carlos García; G Kenny Png; Richard D Bardgett; Manuel Delgado-Baquerizo
Journal:  ISME J       Date:  2021-02-09       Impact factor: 10.302

7.  Methodological Aspects of Multiplex Terminal Restriction Fragment Length Polymorphism-Technique to Describe the Genetic Diversity of Soil Bacteria, Archaea and Fungi.

Authors:  Agata Gryta; Magdalena Frąc
Journal:  Sensors (Basel)       Date:  2020-06-09       Impact factor: 3.576

8.  Microbial communities in top- and subsoil of repacked soil columns respond differently to amendments but their diversity is negatively correlated with plant productivity.

Authors:  Corinne Celestina; Jennifer L Wood; James B Manson; Xiaojuan Wang; Peter W G Sale; Caixian Tang; Ashley E Franks
Journal:  Sci Rep       Date:  2019-06-20       Impact factor: 4.379

9.  Root Functional Trait and Soil Microbial Coordination: Implications for Soil Respiration in Riparian Agroecosystems.

Authors:  Kira A Borden; Tolulope G Mafa-Attoye; Kari E Dunfield; Naresh V Thevathasan; Andrew M Gordon; Marney E Isaac
Journal:  Front Plant Sci       Date:  2021-07-08       Impact factor: 5.753

10.  Monitoring the dead as an ecosystem indicator.

Authors:  Thomas M Newsome; Brandon Barton; Julia C Buck; Jennifer DeBruyn; Emma Spencer; William J Ripple; Philip S Barton
Journal:  Ecol Evol       Date:  2021-05-01       Impact factor: 2.912

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