Literature DB >> 21764958

Global biogeography and quantitative seasonal dynamics of Gemmatimonadetes in soil.

Jennifer M DeBruyn1, Lauren T Nixon, Mariam N Fawaz, Amy M Johnson, Mark Radosevich.   

Abstract

Bacteria belonging to phylum Gemmatimonadetes comprise approximately 2% of soil bacterial communities. However, little is known of their ecology due to a lack of cultured representation. Here we present evidence from biogeographical analyses and seasonal quantification of Gemmatimonadetes in soils, which suggests an adaptation to low soil moisture.

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Year:  2011        PMID： 21764958      PMCID： PMC3165389          DOI： 10.1128/AEM.05005-11

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  40 in total

1.  Laboratory cultivation of widespread and previously uncultured soil bacteria.

Authors:  Shayne J Joseph; Philip Hugenholtz; Parveen Sangwan; Catherine A Osborne; Peter H Janssen
Journal:  Appl Environ Microbiol       Date:  2003-12       Impact factor: 4.792

2.  Spatial stratification of soil bacterial populations in aggregates of diverse soils.

Authors:  Daniel Mummey; William Holben; Johan Six; Peter Stahl
Journal:  Microb Ecol       Date:  2006-04-06       Impact factor: 4.552

Review 3.  Biogeography: an emerging cornerstone for understanding prokaryotic diversity, ecology, and evolution.

Authors:  Alban Ramette; James M Tiedje
Journal:  Microb Ecol       Date:  2007-02       Impact factor: 4.552

4.  Molecular characterization of an endolithic microbial community in dolomite rock in the central Alps (Switzerland).

Authors:  Thomas Horath; Reinhard Bachofen
Journal:  Microb Ecol       Date:  2009-01-28       Impact factor: 4.552

5.  Characterization of a bacterial community in an abandoned semiarid lead-zinc mine tailing site.

Authors:  Monica O Mendez; Julia W Neilson; Raina M Maier
Journal:  Appl Environ Microbiol       Date:  2008-04-18       Impact factor: 4.792

6.  Land use and climatic factors structure regional patterns in soil microbial communities.

Authors:  Rebecca E Drenovsky; Kerri L Steenwerth; Louise E Jackson; Kate M Scow
Journal:  Glob Ecol Biogeogr       Date:  2010-01       Impact factor: 7.144

7.  Influence of soil characteristics on the diversity of bacteria in the Southern Brazilian Atlantic Forest.

Authors:  H Faoro; A C Alves; E M Souza; L U Rigo; L M Cruz; S M Al-Janabi; R A Monteiro; V A Baura; F O Pedrosa
Journal:  Appl Environ Microbiol       Date:  2010-05-21       Impact factor: 4.792

8.  The effects of chronic nitrogen fertilization on alpine tundra soil microbial communities: implications for carbon and nitrogen cycling.

Authors:  Diana R Nemergut; Alan R Townsend; Sarah R Sattin; Kristen R Freeman; Noah Fierer; Jason C Neff; William D Bowman; Christopher W Schadt; Michael N Weintraub; Steven K Schmidt
Journal:  Environ Microbiol       Date:  2008-09-01       Impact factor: 5.491

9.  Elevated atmospheric CO2 affects soil microbial diversity associated with trembling aspen.

Authors:  Celine Lesaulnier; Dimitris Papamichail; Sean McCorkle; Bernard Ollivier; Steven Skiena; Safiyh Taghavi; Donald Zak; Daniel van der Lelie
Journal:  Environ Microbiol       Date:  2008-01-24       Impact factor: 5.491

10.  Archaeal and bacterial community composition of sediment and plankton from a suboxic freshwater pond.

Authors:  Céline Briée; David Moreira; Purificación López-García
Journal:  Res Microbiol       Date:  2007-01-27       Impact factor: 3.992
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  95 in total

1.  Vertical distribution of bacterial community is associated with the degree of soil organic matter decomposition in the active layer of moist acidic tundra.

Authors:  Hye Min Kim; Min Jin Lee; Ji Young Jung; Chung Yeon Hwang; Mincheol Kim; Hee-Myong Ro; Jongsik Chun; Yoo Kyung Lee
Journal:  J Microbiol       Date:  2016-10-29       Impact factor: 3.422

2.  Impact of soil salinity on the microbial structure of halophyte rhizosphere microbiome.

Authors:  Salma Mukhtar; Babur Saeed Mirza; Samina Mehnaz; Muhammad Sajjad Mirza; Joan Mclean; Kauser Abdulla Malik
Journal:  World J Microbiol Biotechnol       Date:  2018-08-20       Impact factor: 3.312

3.  Organic layer serves as a hotspot of microbial activity and abundance in Arctic tundra soils.

Authors:  Seung-Hoon Lee; Inyoung Jang; Namyi Chae; Taejin Choi; Hojeong Kang
Journal:  Microb Ecol       Date:  2012-09-15       Impact factor: 4.552

4.  Temporal variability in soil microbial communities across land-use types.

Authors:  Christian L Lauber; Kelly S Ramirez; Zach Aanderud; Jay Lennon; Noah Fierer
Journal:  ISME J       Date:  2013-04-04       Impact factor: 10.302

5.  Changes in soil bacterial community structure with increasing disturbance frequency.

Authors:  Mincheol Kim; Eunjung Heo; Hojeong Kang; Jonathan Adams
Journal:  Microb Ecol       Date:  2013-05-17       Impact factor: 4.552

6.  Novel acsF Gene Primers Revealed a Diverse Phototrophic Bacterial Population, Including Gemmatimonadetes, in Lake Taihu (China).

Authors:  Yili Huang; Yanhua Zeng; Hang Lu; Hao Feng; Yonghui Zeng; Michal Koblížek
Journal:  Appl Environ Microbiol       Date:  2016-08-30       Impact factor: 4.792

7.  Dynamics of bacterial community succession in a salt marsh chronosequence: evidences for temporal niche partitioning.

Authors:  Francisco Dini-Andreote; Michele de Cássia Pereira e Silva; Xavier Triadó-Margarit; Emilio O Casamayor; Jan Dirk van Elsas; Joana Falcão Salles
Journal:  ISME J       Date:  2014-04-17       Impact factor: 10.302

8.  Dynamics of microbial community composition and soil organic carbon mineralization in soil following addition of pyrogenic and fresh organic matter.

Authors:  Thea Whitman; Charles Pepe-Ranney; Akio Enders; Chantal Koechli; Ashley Campbell; Daniel H Buckley; Johannes Lehmann
Journal:  ISME J       Date:  2016-04-29       Impact factor: 10.302

9.  Genomes of Novel Microbial Lineages Assembled from the Sub-Ice Waters of Lake Baikal.

Authors:  Pedro J Cabello-Yeves; Tamara I Zemskaya; Riccardo Rosselli; Felipe H Coutinho; Alexandra S Zakharenko; Vadim V Blinov; Francisco Rodriguez-Valera
Journal:  Appl Environ Microbiol       Date:  2017-12-15       Impact factor: 4.792

10.  High Microbial Diversity Promotes Soil Ecosystem Functioning.

Authors:  Pierre-Alain Maron; Amadou Sarr; Aurore Kaisermann; Jean Lévêque; Olivier Mathieu; Julien Guigue; Battle Karimi; Laetitia Bernard; Samuel Dequiedt; Sébastien Terrat; Abad Chabbi; Lionel Ranjard
Journal:  Appl Environ Microbiol       Date:  2018-04-16       Impact factor: 4.792
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