Literature DB >> 18695234

Colloquium paper: resistance, resilience, and redundancy in microbial communities.

Steven D Allison1, Jennifer B H Martiny.   

Abstract

Although it is generally accepted that plant community composition is key for predicting rates of ecosystem processes in the face of global change, microbial community composition is often ignored in ecosystem modeling. To address this issue, we review recent experiments and assess whether microbial community composition is resistant, resilient, or functionally redundant in response to four different disturbances. We find that the composition of most microbial groups is sensitive and not immediately resilient to disturbance, regardless of taxonomic breadth of the group or the type of disturbance. Other studies demonstrate that changes in composition are often associated with changes in ecosystem process rates. Thus, changes in microbial communities due to disturbance may directly affect ecosystem processes. Based on these relationships, we propose a simple framework to incorporate microbial community composition into ecosystem process models. We conclude that this effort would benefit from more empirical data on the links among microbial phylogeny, physiological traits, and disturbance responses. These relationships will determine how readily microbial community composition can be used to predict the responses of ecosystem processes to global change.

Mesh:

Year:  2008        PMID: 18695234      PMCID: PMC2556421          DOI: 10.1073/pnas.0801925105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  26 in total

1.  Plant diversity enhances ecosystem responses to elevated CO2 and nitrogen deposition.

Authors:  P B Reich; J Knops; D Tilman; J Craine; D Ellsworth; M Tjoelker; T Lee; D Wedin; S Naeem; D Bahauddin; G Hendrey; S Jose; K Wrage; J Goth; W Bengston
Journal:  Nature       Date:  2001-04-12       Impact factor: 49.962

2.  Producer-decomposer co-dependency influences biodiversity effects.

Authors:  S Naeem; D R Hahn; G Schuurman
Journal:  Nature       Date:  2000-02-17       Impact factor: 49.962

3.  Prokaryotic diversity--magnitude, dynamics, and controlling factors.

Authors:  Vigdis Torsvik; Lise Øvreås; Tron Frede Thingstad
Journal:  Science       Date:  2002-05-10       Impact factor: 47.728

Review 4.  Microbial diversity and function in soil: from genes to ecosystems.

Authors:  Vigdis Torsvik; Lise Øvreås
Journal:  Curr Opin Microbiol       Date:  2002-06       Impact factor: 7.934

5.  The contribution of species richness and composition to bacterial services.

Authors:  Thomas Bell; Jonathan A Newman; Bernard W Silverman; Sarah L Turner; Andrew K Lilley
Journal:  Nature       Date:  2005-08-25       Impact factor: 49.962

6.  Towards a genome-based taxonomy for prokaryotes.

Authors:  Konstantinos T Konstantinidis; James M Tiedje
Journal:  J Bacteriol       Date:  2005-09       Impact factor: 3.490

7.  Decline of soil microbial diversity does not influence the resistance and resilience of key soil microbial functional groups following a model disturbance.

Authors:  Sophie Wertz; Valérie Degrange; James I Prosser; Franck Poly; Claire Commeaux; Nadine Guillaumaud; Xavier Le Roux
Journal:  Environ Microbiol       Date:  2007-09       Impact factor: 5.491

8.  Low-concentration kinetics of atmospheric CH4 oxidation in soil and mechanism of NH4+ inhibition

Authors: 
Journal:  Appl Environ Microbiol       Date:  1998-11       Impact factor: 4.792

Review 9.  Prokaryotes: the unseen majority.

Authors:  W B Whitman; D C Coleman; W J Wiebe
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-09       Impact factor: 11.205

10.  Molecular and metabolic characterization of cold-tolerant alpine soil Pseudomonas sensu stricto.

Authors:  A F Meyer; D A Lipson; A P Martin; C W Schadt; S K Schmidt
Journal:  Appl Environ Microbiol       Date:  2004-01       Impact factor: 4.792

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  500 in total

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Authors:  Aline Frossard; Linda Gerull; Michael Mutz; Mark O Gessner
Journal:  ISME J       Date:  2011-10-27       Impact factor: 10.302

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Journal:  Microb Ecol       Date:  2011-12-23       Impact factor: 4.552

3.  Recruitment of members from the rare biosphere of marine bacterioplankton communities after an environmental disturbance.

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Journal:  Appl Environ Microbiol       Date:  2011-12-22       Impact factor: 4.792

4.  Assessing cross-disciplinary efficiency of soil amendments for agro-biologically, economically, and ecologically integrated soil health management.

Authors:  Haddish Melakeberhan
Journal:  J Nematol       Date:  2010-03       Impact factor: 1.402

Review 5.  From structure to function: the ecology of host-associated microbial communities.

Authors:  Courtney J Robinson; Brendan J M Bohannan; Vincent B Young
Journal:  Microbiol Mol Biol Rev       Date:  2010-09       Impact factor: 11.056

6.  Dormancy contributes to the maintenance of microbial diversity.

Authors:  Stuart E Jones; Jay T Lennon
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-15       Impact factor: 11.205

7.  Recovery of methanotrophs from disturbance: population dynamics, evenness and functioning.

Authors:  Adrian Ho; Claudia Lüke; Peter Frenzel
Journal:  ISME J       Date:  2010-10-28       Impact factor: 10.302

8.  The extent of functional redundancy changes as species' roles shift in different environments.

Authors:  Ingo Fetzer; Karin Johst; Robert Schäwe; Thomas Banitz; Hauke Harms; Antonis Chatzinotas
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-17       Impact factor: 11.205

9.  Microbial Community Structure and Function Decoupling Across a Phosphorus Gradient in Streams.

Authors:  Erick S LeBrun; Ryan S King; Jeffrey A Back; Sanghoon Kang
Journal:  Microb Ecol       Date:  2017-07-18       Impact factor: 4.552

10.  Ectomycorrhizal fungi are associated with reduced nitrogen cycling rates in temperate forest soils without corresponding trends in bacterial functional groups.

Authors:  Mustafa Saifuddin; Jennifer M Bhatnagar; Richard P Phillips; Adrien C Finzi
Journal:  Oecologia       Date:  2021-06-25       Impact factor: 3.225

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