Literature DB >> 29449509

Predicting reaction performance in C-N cross-coupling using machine learning.

Derek T Ahneman1, Jesús G Estrada1, Shishi Lin2, Spencer D Dreher3, Abigail G Doyle4.   

Abstract

Machine learning methods are becoming integral to scientific inquiry in numerous disciplines. We demonstrated that machine learning can be used to predict the performance of a synthetic reaction in multidimensional chemical space using data obtained via high-throughput experimentation. We created scripts to compute and extract atomic, molecular, and vibrational descriptors for the components of a palladium-catalyzed Buchwald-Hartwig cross-coupling of aryl halides with 4-methylaniline in the presence of various potentially inhibitory additives. Using these descriptors as inputs and reaction yield as output, we showed that a random forest algorithm provides significantly improved predictive performance over linear regression analysis. The random forest model was also successfully applied to sparse training sets and out-of-sample prediction, suggesting its value in facilitating adoption of synthetic methodology.
Copyright © 2018 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

Entities:  

Year:  2018        PMID: 29449509     DOI: 10.1126/science.aar5169

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  59 in total

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Authors:  Kevin Maik Jablonka; Daniele Ongari; Seyed Mohamad Moosavi; Berend Smit
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2.  Bayesian reaction optimization as a tool for chemical synthesis.

Authors:  Benjamin J Shields; Jason Stevens; Jun Li; Marvin Parasram; Farhan Damani; Jesus I Martinez Alvarado; Jacob M Janey; Ryan P Adams; Abigail G Doyle
Journal:  Nature       Date:  2021-02-03       Impact factor: 49.962

3.  Computational Approach to Molecular Catalysis by 3d Transition Metals: Challenges and Opportunities.

Authors:  Konstantinos D Vogiatzis; Mikhail V Polynski; Justin K Kirkland; Jacob Townsend; Ali Hashemi; Chong Liu; Evgeny A Pidko
Journal:  Chem Rev       Date:  2018-10-30       Impact factor: 60.622

4.  Artificial Intelligence and Personalized Medicine.

Authors:  Nicholas J Schork
Journal:  Cancer Treat Res       Date:  2019

5.  Pd-Catalyzed C-N Coupling Reactions Facilitated by Organic Bases: Mechanistic Investigation Leads to Enhanced Reactivity in the Arylation of Weakly Binding Amines.

Authors:  Joseph M Dennis; Nicholas A White; Richard Y Liu; Stephen L Buchwald
Journal:  ACS Catal       Date:  2019-03-15       Impact factor: 13.084

6.  A unified machine-learning protocol for asymmetric catalysis as a proof of concept demonstration using asymmetric hydrogenation.

Authors:  Sukriti Singh; Monika Pareek; Avtar Changotra; Sayan Banerjee; Bangaru Bhaskararao; P Balamurugan; Raghavan B Sunoj
Journal:  Proc Natl Acad Sci U S A       Date:  2020-01-08       Impact factor: 11.205

7.  Breaking the Base Barrier: An Electron-Deficient Palladium Catalyst Enables the Use of a Common Soluble Base in C-N Coupling.

Authors:  Joseph M Dennis; Nicholas A White; Richard Y Liu; Stephen L Buchwald
Journal:  J Am Chem Soc       Date:  2018-03-22       Impact factor: 15.419

8.  10-N-heterocylic aryl-isoxazole-amides (AIMs) have robust anti-tumor activity against breast and brain cancer cell lines and useful fluorescence properties.

Authors:  Matthew J Weaver; Sascha Stump; Michael J Campbell; Donald S Backos; Chun Li; Philip Reigan; Earle Adams; Howard D Beall; Nicholas R Natale
Journal:  Bioorg Med Chem       Date:  2020-09-24       Impact factor: 3.641

9.  Transition State Force Field for the Asymmetric Redox-Relay Heck Reaction.

Authors:  Anthony R Rosales; Sean P Ross; Paul Helquist; Per-Ola Norrby; Matthew S Sigman; Olaf Wiest
Journal:  J Am Chem Soc       Date:  2020-05-14       Impact factor: 15.419

10.  What Does the Machine Learn? Knowledge Representations of Chemical Reactivity.

Authors:  Joshua A Kammeraad; Jack Goetz; Eric A Walker; Ambuj Tewari; Paul M Zimmerman
Journal:  J Chem Inf Model       Date:  2020-03-03       Impact factor: 4.956

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