Literature DB >> 29413418

DISE: A Seed-Dependent RNAi Off-Target Effect That Kills Cancer Cells.

William Putzbach1, Quan Q Gao1, Monal Patel1, Ashley Haluck-Kangas1, Andrea E Murmann1, Marcus E Peter2.   

Abstract

Off-target effects (OTEs) represent a significant caveat for RNAi caused by substantial complementarity between siRNAs and unintended mRNAs. We now discuss the existence of three types of seed-dependent OTEs (sOTEs). Type I involves unintended targeting through the guide strand seed of an siRNA. Type II is caused by the activity of the seed on the designated siRNA passenger strand when loaded into the RNA-induced silencing complex (RISC). Both type I and II sOTEs will elicit unpredictable cellular responses. By contrast, in sOTE type III the guide strand seed preferentially targets essential survival genes resulting in death induced by survival gene elimination (DISE). In this Opinion article, we discuss DISE as a consequence of RNAi that may preferentially affect cancer cells.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  DISE; Fas; OTE; RNAi; cancer; cell death

Mesh:

Substances:

Year:  2018        PMID: 29413418      PMCID: PMC5806146          DOI: 10.1016/j.trecan.2017.11.007

Source DB:  PubMed          Journal:  Trends Cancer        ISSN: 2405-8025


  63 in total

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Review 7.  Small silencing RNAs: an expanding universe.

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8.  siRNA-mediated off-target gene silencing triggered by a 7 nt complementation.

Authors:  Xiaoyu Lin; Xiaoan Ruan; Mark G Anderson; Jeffrey A McDowell; Paul E Kroeger; Stephen W Fesik; Yu Shen
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  6 in total

1.  CD95/Fas ligand mRNA is toxic to cells.

Authors:  Will Putzbach; Ashley Haluck-Kangas; Quan Q Gao; Aishe A Sarshad; Elizabeth T Bartom; Austin Stults; Abdul S Qadir; Markus Hafner; Marcus E Peter
Journal:  Elife       Date:  2018-10-16       Impact factor: 8.140

Review 2.  DISE/6mer seed toxicity-a powerful anti-cancer mechanism with implications for other diseases.

Authors:  Ashley Haluck-Kangas; Monal Patel; Bidur Paudel; Aparajitha Vaidyanathan; Andrea E Murmann; Marcus E Peter
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3.  The Ratio of Toxic-to-Nontoxic miRNAs Predicts Platinum Sensitivity in Ovarian Cancer.

Authors:  Monal Patel; Yinu Wang; Elizabeth T Bartom; Rohin Dhir; Kenneth P Nephew; Daniela Matei; Andrea E Murmann; Ernst Lengyel; Marcus E Peter
Journal:  Cancer Res       Date:  2021-06-15       Impact factor: 12.701

4.  6mer Seed Toxicity in Viral microRNAs.

Authors:  Andrea E Murmann; Elizabeth T Bartom; Matthew J Schipma; Jacob Vilker; Siquan Chen; Marcus E Peter
Journal:  iScience       Date:  2019-12-11

5.  shRNAs targeting mouse Adam10 diminish cell response to proinflammatory stimuli independently of Adam10 silencing.

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6.  Identification of the toxic 6mer seed consensus for human cancer cells.

Authors:  Monal Patel; Elizabeth T Bartom; Bidur Paudel; Masha Kocherginsky; Kaitlyn L O'Shea; Andrea E Murmann; Marcus E Peter
Journal:  Sci Rep       Date:  2022-03-24       Impact factor: 4.379

  6 in total

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