Literature DB >> 29359908

Potent Inhibitors of Mycobacterium tuberculosis Growth Identified by Using in-Cell NMR-based Screening.

Christopher M DeMott1, Roxie Girardin2, Jacqueline Cobbert1, Sergey Reverdatto1, David S Burz1, Kathleen McDonough2,3, Alexander Shekhtman1.   

Abstract

In-cell NMR spectroscopy was used to screen for drugs that disrupt the interaction between prokaryotic ubiquitin like protein, Pup, and mycobacterial proteasome pan class="Chemical">ATPase, Mpan>. This interaction is critical for n>n class="Species">Mycobacterium tuberculosis resistance against nitric oxide (NO) stress; interruption of this process was proposed as a mechanism to control latent infection. Three compounds isolated from the NCI Diversity set III library rescued the physiological proteasome substrate from degradation suggesting that the proteasome degradation pathway was selectively targeted. Two of the compounds bind to Mpa with sub-micromolar to nanomolar affinity, and all three exhibit potency toward mycobacteria comparable to antibiotics currently available on the market, inhibiting growth in the low micromolar range.

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Year:  2018        PMID: 29359908      PMCID: PMC5856640          DOI: 10.1021/acschembio.7b00879

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  45 in total

1.  High-resolution macromolecular NMR spectroscopy inside living cells.

Authors:  Z Serber; A T Keatinge-Clay; R Ledwidge; A E Kelly; S M Miller; V Dötsch
Journal:  J Am Chem Soc       Date:  2001-03-14       Impact factor: 15.419

2.  New substructure filters for removal of pan assay interference compounds (PAINS) from screening libraries and for their exclusion in bioassays.

Authors:  Jonathan B Baell; Georgina A Holloway
Journal:  J Med Chem       Date:  2010-04-08       Impact factor: 7.446

3.  Characterization of a Mycobacterium tuberculosis proteasomal ATPase homologue.

Authors:  K Heran Darwin; Gang Lin; Zhiqiang Chen; Huilin Li; Carl F Nathan
Journal:  Mol Microbiol       Date:  2005-01       Impact factor: 3.501

Review 4.  Proteasome inhibitors in cancer therapy.

Authors:  Elisabet E Manasanch; Robert Z Orlowski
Journal:  Nat Rev Clin Oncol       Date:  2017-01-24       Impact factor: 66.675

5.  Molecular analysis of the prokaryotic ubiquitin-like protein (Pup) conjugation pathway in Mycobacterium tuberculosis.

Authors:  Francisca A Cerda-Maira; Michael J Pearce; Michele Fuortes; William R Bishai; Stevan R Hubbard; K Heran Darwin
Journal:  Mol Microbiol       Date:  2010-09       Impact factor: 3.501

Review 6.  Multidrug resistance in bacteria.

Authors:  Hiroshi Nikaido
Journal:  Annu Rev Biochem       Date:  2009       Impact factor: 23.643

7.  Binding-induced folding of prokaryotic ubiquitin-like protein on the Mycobacterium proteasomal ATPase targets substrates for degradation.

Authors:  Tao Wang; K Heran Darwin; Huilin Li
Journal:  Nat Struct Mol Biol       Date:  2010-10-17       Impact factor: 15.369

8.  A family of acr-coregulated Mycobacterium tuberculosis genes shares a common DNA motif and requires Rv3133c (dosR or devR) for expression.

Authors:  Matthew A Florczyk; Lee Ann McCue; Anjan Purkayastha; Egidio Currenti; Meyer J Wolin; Kathleen A McDonough
Journal:  Infect Immun       Date:  2003-09       Impact factor: 3.441

9.  Structural Basis of Mycobacterium tuberculosis Transcription and Transcription Inhibition.

Authors:  Wei Lin; Soma Mandal; David Degen; Yu Liu; Yon W Ebright; Shengjian Li; Yu Feng; Yu Zhang; Sukhendu Mandal; Yi Jiang; Shuang Liu; Matthew Gigliotti; Meliza Talaue; Nancy Connell; Kalyan Das; Eddy Arnold; Richard H Ebright
Journal:  Mol Cell       Date:  2017-04-06       Impact factor: 17.970

10.  Caught in action: selecting peptide aptamers against intrinsically disordered proteins in live cells.

Authors:  Jacqueline D Cobbert; Christopher DeMott; Subhabrata Majumder; Eric A Smith; Sergey Reverdatto; David S Burz; Kathleen A McDonough; Alexander Shekhtman
Journal:  Sci Rep       Date:  2015-03-24       Impact factor: 4.379

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  11 in total

1.  Improved sensitivity and resolution of in-cell NMR spectra.

Authors:  David S Burz; Leonard Breindel; Alexander Shekhtman
Journal:  Methods Enzymol       Date:  2019-03-13       Impact factor: 1.600

Review 2.  In-Cell NMR Spectroscopy of Intrinsically Disordered Proteins.

Authors:  Nicholas Sciolino; David S Burz; Alexander Shekhtman
Journal:  Proteomics       Date:  2019-01-15       Impact factor: 3.984

Review 3.  Radio Signals from Live Cells: The Coming of Age of In-Cell Solution NMR.

Authors:  Enrico Luchinat; Matteo Cremonini; Lucia Banci
Journal:  Chem Rev       Date:  2022-01-21       Impact factor: 72.087

Review 4.  Targeting the Proteostasis Network for Mycobacterial Drug Discovery.

Authors:  Tania J Lupoli; Julien Vaubourgeix; Kristin Burns-Huang; Ben Gold
Journal:  ACS Infect Dis       Date:  2018-03-02       Impact factor: 5.084

5.  Active metabolism unmasks functional protein-protein interactions in real time in-cell NMR.

Authors:  Leonard Breindel; David S Burz; Alexander Shekhtman
Journal:  Commun Biol       Date:  2020-05-21

6.  Drug Screening in Human Cells by NMR Spectroscopy Allows the Early Assessment of Drug Potency.

Authors:  Enrico Luchinat; Letizia Barbieri; Matteo Cremonini; Alessio Nocentini; Claudiu T Supuran; Lucia Banci
Journal:  Angew Chem Int Ed Engl       Date:  2020-02-25       Impact factor: 15.336

Review 7.  Applications of Solution NMR in Drug Discovery.

Authors:  Li Shi; Naixia Zhang
Journal:  Molecules       Date:  2021-01-22       Impact factor: 4.411

8.  Intact ribosomes drive the formation of protein quinary structure.

Authors:  Leonard Breindel; Jianchao Yu; David S Burz; Alexander Shekhtman
Journal:  PLoS One       Date:  2020-04-24       Impact factor: 3.240

9.  Intracellular Binding/Unbinding Kinetics of Approved Drugs to Carbonic Anhydrase II Observed by in-Cell NMR.

Authors:  Enrico Luchinat; Letizia Barbieri; Matteo Cremonini; Alessio Nocentini; Claudiu T Supuran; Lucia Banci
Journal:  ACS Chem Biol       Date:  2020-09-30       Impact factor: 5.100

10.  Determination of intracellular protein-ligand binding affinity by competition binding in-cell NMR.

Authors:  Enrico Luchinat; Letizia Barbieri; Matteo Cremonini; Matteo Pennestri; Alessio Nocentini; Claudiu T Supuran; Lucia Banci
Journal:  Acta Crystallogr D Struct Biol       Date:  2021-09-27       Impact factor: 7.652

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