Literature DB >> 29331054

ARTIST: A fully automated artifact rejection algorithm for single-pulse TMS-EEG data.

Wei Wu1,2,3,4, Corey J Keller1,2,3, Nigel C Rogasch5, Parker Longwell1,2,3, Emmanuel Shpigel1,2,3, Camarin E Rolle1,2,3, Amit Etkin1,2,3.   

Abstract

Concurrent single-pulse TMS-EEG (spTMS-EEG) is an emerging noninvasive tool for probing causal brain dynamics in humans. However, in addition to the common artifacts in standard EEG data, spTMS-EEG data suffer from enormous stimulation-induced artifacts, posing significant challenges to the extraction of neural information. Typically, neural signals are analyzed after a manual time-intensive and often subjective process of artifact rejection. Here we describe a fully automated algorithm for spTMS-EEG artifact rejection. A key step of this algorithm is to decompose the spTMS-EEG data into statistically independent components (ICs), and then train a pattern classifier to automatically identify artifact components based on knowledge of the spatio-temporal profile of both neural and artefactual activities. The autocleaned and hand-cleaned data yield qualitatively similar group evoked potential waveforms. The algorithm achieves a 95% IC classification accuracy referenced to expert artifact rejection performance, and does so across a large number of spTMS-EEG data sets (n = 90 stimulation sites), retains high accuracy across stimulation sites/subjects/populations/montages, and outperforms current automated algorithms. Moreover, the algorithm was superior to the artifact rejection performance of relatively novice individuals, who would be the likely users of spTMS-EEG as the technique becomes more broadly disseminated. In summary, our algorithm provides an automated, fast, objective, and accurate method for cleaning spTMS-EEG data, which can increase the utility of TMS-EEG in both clinical and basic neuroscience settings.
© 2018 Wiley Periodicals, Inc.

Entities:  

Keywords:  artifact rejection; electroencephalogram; transcranial magnetic stimulation

Mesh:

Year:  2018        PMID: 29331054      PMCID: PMC6866546          DOI: 10.1002/hbm.23938

Source DB:  PubMed          Journal:  Hum Brain Mapp        ISSN: 1065-9471            Impact factor:   5.038


  53 in total

1.  ADJUST: An automatic EEG artifact detector based on the joint use of spatial and temporal features.

Authors:  Andrea Mognon; Jorge Jovicich; Lorenzo Bruzzone; Marco Buiatti
Journal:  Psychophysiology       Date:  2011-02       Impact factor: 4.016

2.  FASTER: Fully Automated Statistical Thresholding for EEG artifact Rejection.

Authors:  H Nolan; R Whelan; R B Reilly
Journal:  J Neurosci Methods       Date:  2010-07-21       Impact factor: 2.390

3.  On the influence of high-pass filtering on ICA-based artifact reduction in EEG-ERP.

Authors:  Irene Winkler; Stefan Debener; Klaus-Robert Müller; Michael Tangermann
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2015

4.  Short-latency artifacts associated with concurrent TMS-EEG.

Authors:  Nigel C Rogasch; Richard H Thomson; Zafiris J Daskalakis; Paul B Fitzgerald
Journal:  Brain Stimul       Date:  2013-04-28       Impact factor: 8.955

5.  TMS-evoked long-lasting artefacts: A new adaptive algorithm for EEG signal correction.

Authors:  Elias P Casula; Alessandra Bertoldo; Vincenza Tarantino; Michele Maiella; Giacomo Koch; John C Rothwell; Gianna M Toffolo; Patrizia S Bisiacchi
Journal:  Clin Neurophysiol       Date:  2017-06-17       Impact factor: 3.708

6.  Attention Modulates TMS-Locked Alpha Oscillations in the Visual Cortex.

Authors:  Jim D Herring; Gregor Thut; Ole Jensen; Til O Bergmann
Journal:  J Neurosci       Date:  2015-10-28       Impact factor: 6.167

7.  Classification of independent components of EEG into multiple artifact classes.

Authors:  Laura Frølich; Tobias S Andersen; Morten Mørup
Journal:  Psychophysiology       Date:  2014-07-22       Impact factor: 4.016

8.  An on-line transformation of EEG scalp potentials into orthogonal source derivations.

Authors:  B Hjorth
Journal:  Electroencephalogr Clin Neurophysiol       Date:  1975-11

9.  Indicators for Remission of Suicidal Ideation Following Magnetic Seizure Therapy in Patients With Treatment-Resistant Depression.

Authors:  Yinming Sun; Faranak Farzan; Benoit H Mulsant; Tarek K Rajji; Paul B Fitzgerald; Mera S Barr; Jonathan Downar; Willy Wong; Daniel M Blumberger; Zafiris J Daskalakis
Journal:  JAMA Psychiatry       Date:  2016-04       Impact factor: 21.596

10.  Reduced evoked gamma oscillations in the frontal cortex in schizophrenia patients: a TMS/EEG study.

Authors:  Fabio Ferrarelli; Marcello Massimini; Michael J Peterson; Brady A Riedner; Mariana Lazar; Michael J Murphy; Reto Huber; Mario Rosanova; Andrew L Alexander; Ned Kalin; Giulio Tononi
Journal:  Am J Psychiatry       Date:  2008-05-15       Impact factor: 18.112

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  18 in total

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Journal:  J Vis Exp       Date:  2018-08-17       Impact factor: 1.355

2.  Using fMRI connectivity to define a treatment-resistant form of post-traumatic stress disorder.

Authors:  Amit Etkin; Adi Maron-Katz; Wei Wu; Gregory A Fonzo; Julia Huemer; Petra E Vértes; Brian Patenaude; Jonas Richiardi; Madeleine S Goodkind; Corey J Keller; Jaime Ramos-Cejudo; Yevgeniya V Zaiko; Kathy K Peng; Emmanuel Shpigel; Parker Longwell; Russ T Toll; Allison Thompson; Sanno Zack; Bryan Gonzalez; Raleigh Edelstein; Jingyun Chen; Irene Akingbade; Elizabeth Weiss; Roland Hart; Silas Mann; Kathleen Durkin; Steven H Baete; Fernando E Boada; Afia Genfi; Jillian Autea; Jennifer Newman; Desmond J Oathes; Steven E Lindley; Duna Abu-Amara; Bruce A Arnow; Nicolas Crossley; Joachim Hallmayer; Silvia Fossati; Barbara O Rothbaum; Charles R Marmar; Edward T Bullmore; Ruth O'Hara
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3.  Intracortical Dynamics Underlying Repetitive Stimulation Predicts Changes in Network Connectivity.

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4.  ARTIST: A fully automated artifact rejection algorithm for single-pulse TMS-EEG data.

Authors:  Wei Wu; Corey J Keller; Nigel C Rogasch; Parker Longwell; Emmanuel Shpigel; Camarin E Rolle; Amit Etkin
Journal:  Hum Brain Mapp       Date:  2018-01-13       Impact factor: 5.038

Review 5.  Central nervous system physiology.

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6.  Identifying transcranial magnetic stimulation induced EEG signatures of different neuronal elements in primary motor cortex.

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7.  The Role of the Dorsal-Lateral Prefrontal Cortex in Reward Sensitivity During Approach-Avoidance Conflict.

Authors:  Camarin E Rolle; Mads L Pedersen; Noriah Johnson; Ken-Ichi Amemori; Maria Ironside; Ann M Graybiel; Diego A Pizzagalli; Amit Etkin
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Review 8.  Personalizing neuromodulation.

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Journal:  Int J Psychophysiol       Date:  2019-01-24       Impact factor: 2.997

9.  EPOS: EEG Processing Open-Source Scripts.

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10.  Mapping causal circuit dynamics in stroke using simultaneous electroencephalography and transcranial magnetic stimulation.

Authors:  Camarin E Rolle; Fiona M Baumer; Joshua T Jordan; Ketura Berry; Madelleine Garcia; Karen Monusko; Hersh Trivedi; Wei Wu; Russell Toll; Marion S Buckwalter; Maarten Lansberg; Amit Etkin
Journal:  BMC Neurol       Date:  2021-07-16       Impact factor: 2.474

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