Literature DB >> 29313527

Physical principles of intracellular organization via active and passive phase transitions.

Joel Berry1, Clifford P Brangwynne, Mikko Haataja.   

Abstract

Exciting recent developments suggest that phase transitions represent an important and ubiquitous mechanism underlying intracellular organization. We describe key experimental findings in this area of study, as well as the application of classical theoretical approaches for quantitatively understanding these data. We also discuss the way in which equilibrium thermodynamic driving forces may interface with the fundamentally out-of-equilibrium nature of living cells. In particular, time and/or space-dependent concentration profiles may modulate the phase behavior of biomolecules in living cells. We suggest future directions for both theoretical and experimental work that will shed light on the way in which biological activity modulates the assembly, properties, and function of viscoelastic states of living matter.

Year:  2018        PMID: 29313527     DOI: 10.1088/1361-6633/aaa61e

Source DB:  PubMed          Journal:  Rep Prog Phys        ISSN: 0034-4885


  88 in total

1.  Mapping Local and Global Liquid Phase Behavior in Living Cells Using Photo-Oligomerizable Seeds.

Authors:  Dan Bracha; Mackenzie T Walls; Ming-Tzo Wei; Lian Zhu; Martin Kurian; José L Avalos; Jared E Toettcher; Clifford P Brangwynne
Journal:  Cell       Date:  2018-11-29       Impact factor: 41.582

2.  The Role of Cohesiveness in the Permeability of the Spatial Assemblies of FG Nucleoporins.

Authors:  Chad Gu; Andrei Vovk; Tiantian Zheng; Rob D Coalson; Anton Zilman
Journal:  Biophys J       Date:  2019-03-07       Impact factor: 4.033

Review 3.  Do Cellular Condensates Accelerate Biochemical Reactions? Lessons from Microdroplet Chemistry.

Authors:  Wylie Stroberg; Santiago Schnell
Journal:  Biophys J       Date:  2018-07-03       Impact factor: 4.033

Review 4.  Physical Chemistry of Cellular Liquid-Phase Separation.

Authors:  Emily P Bentley; Benjamin B Frey; Ashok A Deniz
Journal:  Chemistry       Date:  2019-02-07       Impact factor: 5.236

Review 5.  Formation of Chromatin Subcompartments by Phase Separation.

Authors:  Fabian Erdel; Karsten Rippe
Journal:  Biophys J       Date:  2018-04-06       Impact factor: 4.033

6.  Formation of liquid-like cellular organelles depends on their composition.

Authors:  Chiu Fan Lee
Journal:  Nature       Date:  2020-05       Impact factor: 49.962

7.  CDK-Regulated Phase Separation Seeded by Histone Genes Ensures Precise Growth and Function of Histone Locus Bodies.

Authors:  Woonyung Hur; James P Kemp; Marco Tarzia; Victoria E Deneke; William F Marzluff; Robert J Duronio; Stefano Di Talia
Journal:  Dev Cell       Date:  2020-06-23       Impact factor: 12.270

Review 8.  Advances in Chromatin and Chromosome Research: Perspectives from Multiple Fields.

Authors:  Andrews Akwasi Agbleke; Assaf Amitai; Jason D Buenrostro; Aditi Chakrabarti; Lingluo Chu; Anders S Hansen; Kristen M Koenig; Ajay S Labade; Sirui Liu; Tadasu Nozaki; Sergey Ovchinnikov; Andrew Seeber; Haitham A Shaban; Jan-Hendrik Spille; Andrew D Stephens; Jun-Han Su; Dushan Wadduwage
Journal:  Mol Cell       Date:  2020-08-07       Impact factor: 17.970

Review 9.  Probing and engineering liquid-phase organelles.

Authors:  Dan Bracha; Mackenzie T Walls; Clifford P Brangwynne
Journal:  Nat Biotechnol       Date:  2019-12-02       Impact factor: 54.908

Review 10.  A framework for understanding the functions of biomolecular condensates across scales.

Authors:  Andrew S Lyon; William B Peeples; Michael K Rosen
Journal:  Nat Rev Mol Cell Biol       Date:  2020-11-09       Impact factor: 94.444

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