Literature DB >> 29292063

Replication-Coupled Nucleosome Assembly in the Passage of Epigenetic Information and Cell Identity.

Albert Serra-Cardona1, Zhiguo Zhang2.   

Abstract

During S phase, replicated DNA must be assembled into nucleosomes using both newly synthesized and parental histones in a process that is tightly coupled to DNA replication. This DNA replication-coupled process is regulated by multitude of histone chaperones as well as by histone-modifying enzymes. In recent years novel insights into nucleosome assembly of new H3-H4 tetramers have been gained through studies on the classical histone chaperone CAF-1 and the identification of novel factors involved in this process. Moreover, in vitro reconstitution of chromatin replication has shed light on nucleosome assembly of parental H3-H4, a process that remains elusive. Finally, recent studies have revealed that the replication-coupled nucleosome assembly is important for the determination and maintenance of cell fate in multicellular organisms.
Copyright © 2017 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  DNA replication; cell fate maintenance; epigenetic inheritance; histone modifications; nucleosome assembly

Mesh:

Substances:

Year:  2017        PMID: 29292063      PMCID: PMC5805396          DOI: 10.1016/j.tibs.2017.12.003

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  96 in total

1.  A role for cell-cycle-regulated histone H3 lysine 56 acetylation in the DNA damage response.

Authors:  Hiroshi Masumoto; David Hawke; Ryuji Kobayashi; Alain Verreault
Journal:  Nature       Date:  2005-07-14       Impact factor: 49.962

2.  GINS maintains association of Cdc45 with MCM in replisome progression complexes at eukaryotic DNA replication forks.

Authors:  Agnieszka Gambus; Richard C Jones; Alberto Sanchez-Diaz; Masato Kanemaki; Frederick van Deursen; Ricky D Edmondson; Karim Labib
Journal:  Nat Cell Biol       Date:  2006-03-12       Impact factor: 28.824

3.  Chromatin Constrains the Initiation and Elongation of DNA Replication.

Authors:  Sujan Devbhandari; Jieqing Jiang; Charanya Kumar; Iestyn Whitehouse; Dirk Remus
Journal:  Mol Cell       Date:  2016-12-15       Impact factor: 17.970

4.  A role for Gcn5 in replication-coupled nucleosome assembly.

Authors:  Rebecca J Burgess; Hui Zhou; Junhong Han; Zhiguo Zhang
Journal:  Mol Cell       Date:  2010-02-26       Impact factor: 17.970

5.  PCNA connects DNA replication to epigenetic inheritance in yeast.

Authors:  Z Zhang; K Shibahara; B Stillman
Journal:  Nature       Date:  2000-11-09       Impact factor: 49.962

6.  Structural insight into how the human helicase subunit MCM2 may act as a histone chaperone together with ASF1 at the replication fork.

Authors:  Nicolas Richet; Danni Liu; Pierre Legrand; Christophe Velours; Armelle Corpet; Albane Gaubert; May Bakail; Gwenaelle Moal-Raisin; Raphael Guerois; Christel Compper; Arthur Besle; Berengère Guichard; Genevieve Almouzni; Françoise Ochsenbein
Journal:  Nucleic Acids Res       Date:  2015-01-23       Impact factor: 16.971

Review 7.  Chromatin modifiers and remodellers: regulators of cellular differentiation.

Authors:  Taiping Chen; Sharon Y R Dent
Journal:  Nat Rev Genet       Date:  2013-12-24       Impact factor: 53.242

8.  DNA-mediated association of two histone-bound complexes of yeast Chromatin Assembly Factor-1 (CAF-1) drives tetrasome assembly in the wake of DNA replication.

Authors:  Francesca Mattiroli; Yajie Gu; Tejas Yadav; Jeremy L Balsbaugh; Michael R Harris; Eileen S Findlay; Yang Liu; Catherine A Radebaugh; Laurie A Stargell; Natalie G Ahn; Iestyn Whitehouse; Karolin Luger
Journal:  Elife       Date:  2017-03-18       Impact factor: 8.140

9.  Chromatin Controls DNA Replication Origin Selection, Lagging-Strand Synthesis, and Replication Fork Rates.

Authors:  Christoph F Kurat; Joseph T P Yeeles; Harshil Patel; Anne Early; John F X Diffley
Journal:  Mol Cell       Date:  2016-12-15       Impact factor: 17.970

10.  Transcriptional Regulators Compete with Nucleosomes Post-replication.

Authors:  Srinivas Ramachandran; Steven Henikoff
Journal:  Cell       Date:  2016-04-07       Impact factor: 41.582

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  38 in total

Review 1.  Epigenetic fates of gene silencing established by heterochromatin spreading in cell identity and genome stability.

Authors:  R A Greenstein; Bassem Al-Sady
Journal:  Curr Genet       Date:  2018-11-02       Impact factor: 3.886

2.  PML is recruited to heterochromatin during S phase and represses DAXX-mediated histone H3.3 chromatin assembly.

Authors:  Prashanth Krishna Shastrula; Isabel Sierra; Zhong Deng; Frederick Keeney; James E Hayden; Paul M Lieberman; Susan M Janicki
Journal:  J Cell Sci       Date:  2019-03-26       Impact factor: 5.285

3.  Mutual Balance of Histone Deacetylases 1 and 2 and the Acetyl Reader ATAD2 Regulates the Level of Acetylation of Histone H4 on Nascent Chromatin of Human Cells.

Authors:  Pavlo Lazarchuk; John Hernandez-Villanueva; Maria N Pavlova; Alexander Federation; Michael MacCoss; Julia M Sidorova
Journal:  Mol Cell Biol       Date:  2020-04-13       Impact factor: 4.272

4.  CHAF1B Overexpression: A Brake for the Differentiation of Leukemia Cells.

Authors:  Qing Li; Xu Zhang; Zhiguo Zhang
Journal:  Cancer Cell       Date:  2018-11-12       Impact factor: 31.743

5.  The nucleosome core particle remembers its position through DNA replication and RNA transcription.

Authors:  Gavin Schlissel; Jasper Rine
Journal:  Proc Natl Acad Sci U S A       Date:  2019-09-11       Impact factor: 11.205

6.  Multisite Substrate Recognition in Asf1-Dependent Acetylation of Histone H3 K56 by Rtt109.

Authors:  Lin Zhang; Albert Serra-Cardona; Hui Zhou; Mingzhu Wang; Na Yang; Zhiguo Zhang; Rui-Ming Xu
Journal:  Cell       Date:  2018-07-26       Impact factor: 41.582

7.  Isolation of Proteins on Nascent Chromatin and Characterization by Quantitative Mass Spectrometry.

Authors:  Paula A Agudelo Garcia; Miranda Gardner; Michael A Freitas; Mark R Parthun
Journal:  Methods Mol Biol       Date:  2019

8.  A Missense Mutation in a Large Subunit of Ribonucleotide Reductase Confers Temperature-Gated Tassel Formation.

Authors:  Shiyi Xie; Hongbing Luo; Yumin Huang; Yaxin Wang; Wei Ru; Yunlu Shi; Wei Huang; Hai Wang; Zhaobin Dong; Weiwei Jin
Journal:  Plant Physiol       Date:  2020-10-05       Impact factor: 8.340

9.  Cac1 WHD and PIP domains have distinct roles in replisome progression and genomic stability.

Authors:  Ioannis Tsirkas; Daniel Dovrat; Yang Lei; Angeliki Kalyva; Diana Lotysh; Qing Li; Amir Aharoni
Journal:  Curr Genet       Date:  2020-10-06       Impact factor: 3.886

10.  Molecular mechanisms of eukaryotic origin initiation, replication fork progression, and chromatin maintenance.

Authors:  Zuanning Yuan; Huilin Li
Journal:  Biochem J       Date:  2020-09-30       Impact factor: 3.857

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