Literature DB >> 29223566

Progress in proton-detected solid-state NMR (SSNMR): Super-fast 2D SSNMR collection for nano-mole-scale proteins.

Yoshitaka Ishii1, Ayesha Wickramasinghe2, Isamu Matsuda3, Yuki Endo4, Yuji Ishii4, Yusuke Nishiyama5, Takahiro Nemoto4, Takayuki Kamihara6.   

Abstract

Proton-detected solid-state NMR (SSNMR) spectroscopy has attracted much attention due to its excellent sensitivity and effectiveness in the analysis of trace amounts of amyloid proteins and other important biological systems. In this perspective article, we present the recent sensitivity limit of n class="Chemical">1H-detected SSNMR using "ultra-fast" magic-angle spinning (MAS) at a spinning rate (νR) of 80-100 kHz. It was demonstrated that the high sensitivity of 1H-detected SSNMR at νR of 100 kHz and fast recycling using the paramagnetic-assisted condensed data collection (PACC) approach permitted "super-fast" collection of 1H-detected 2D protein SSNMR. A 1H-detected 2D 1H-15N correlation SSNMR spectrum for ∼27 nmol of a uniformly 13C- and 15N-labeled GB1 protein sample in microcrystalline form was acquired in only 9 s with 50% non-uniform sampling and short recycle delays of 100 ms. Additional data suggests that it is now feasible to detect as little as 1 nmol of the protein in 5.9 h by 1H-detected 2D 1H-15N SSNMR at a nominal signal-to-noise ratio of five. The demonstrated sensitivity is comparable to that of modern solution protein NMR. Moreover, this article summarizes the influence of ultra-fast MAS and 1H-detection on the spectral resolution and sensitivity of protein SSNMR. Recent progress in signal assignment and structural elucidation by 1H-detected protein SSNMR is outlined with both theoretical and experimental aspects.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  (1)H detection; Solid-state NMR; Super-fast 2D NMR; Ultra-fast MAS

Mesh:

Substances:

Year:  2017        PMID: 29223566      PMCID: PMC6387629          DOI: 10.1016/j.jmr.2017.11.011

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  51 in total

1.  Sensitivity enhancement in (13)C solid-state NMR of protein microcrystals by use of paramagnetic metal ions for optimizing (1)H T(1) relaxation.

Authors:  Nalinda P Wickramasinghe; Mrignayani Kotecha; Ago Samoson; Jaan Past; Yoshitaka Ishii
Journal:  J Magn Reson       Date:  2006-11-27       Impact factor: 2.229

2.  Solid-state protein-structure determination with proton-detected triple-resonance 3D magic-angle-spinning NMR spectroscopy.

Authors:  Donghua H Zhou; John J Shea; Andrew J Nieuwkoop; W Trent Franks; Benjamin J Wylie; Charles Mullen; Dennis Sandoz; Chad M Rienstra
Journal:  Angew Chem Int Ed Engl       Date:  2007       Impact factor: 15.336

3.  Sensitivity of nonuniform sampling NMR.

Authors:  Melissa R Palmer; Christopher L Suiter; Geneive E Henry; James Rovnyak; Jeffrey C Hoch; Tatyana Polenova; David Rovnyak
Journal:  J Phys Chem B       Date:  2015-05-18       Impact factor: 2.991

4.  A proton-detected 4D solid-state NMR experiment for protein structure determination.

Authors:  Matthias Huber; Sebastian Hiller; Paul Schanda; Matthias Ernst; Anja Böckmann; René Verel; Beat H Meier
Journal:  Chemphyschem       Date:  2011-02-15       Impact factor: 3.102

5.  Evolution of CPMAS under fast magic-angle-spinning at 100 kHz and beyond.

Authors:  Ayesha Wickramasinghe; Songlin Wang; Isamu Matsuda; Yusuke Nishiyama; Takahiro Nemoto; Yuki Endo; Yoshitaka Ishii
Journal:  Solid State Nucl Magn Reson       Date:  2015-10-08       Impact factor: 2.293

Review 6.  Fast magic-angle sample spinning solid-state NMR at 60-100kHz for natural abundance samples.

Authors:  Yusuke Nishiyama
Journal:  Solid State Nucl Magn Reson       Date:  2016-06-29       Impact factor: 2.293

7.  Proton-detected solid-state NMR spectroscopy of fully protonated proteins at 40 kHz magic-angle spinning.

Authors:  Donghua H Zhou; Gautam Shah; Mircea Cormos; Charles Mullen; Dennis Sandoz; Chad M Rienstra
Journal:  J Am Chem Soc       Date:  2007-08-29       Impact factor: 15.419

8.  TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts.

Authors:  Yang Shen; Frank Delaglio; Gabriel Cornilescu; Ad Bax
Journal:  J Biomol NMR       Date:  2009-06-23       Impact factor: 2.835

9.  NMR Spectroscopic Assignment of Backbone and Side-Chain Protons in Fully Protonated Proteins: Microcrystals, Sedimented Assemblies, and Amyloid Fibrils.

Authors:  Jan Stanek; Loren B Andreas; Kristaps Jaudzems; Diane Cala; Daniela Lalli; Andrea Bertarello; Tobias Schubeis; Inara Akopjana; Svetlana Kotelovica; Kaspars Tars; Andrea Pica; Serena Leone; Delia Picone; Zhi-Qiang Xu; Nicholas E Dixon; Denis Martinez; Mélanie Berbon; Nadia El Mammeri; Abdelmajid Noubhani; Sven Saupe; Birgit Habenstein; Antoine Loquet; Guido Pintacuda
Journal:  Angew Chem Int Ed Engl       Date:  2016-11-16       Impact factor: 15.336

10.  Rapid proton-detected NMR assignment for proteins with fast magic angle spinning.

Authors:  Emeline Barbet-Massin; Andrew J Pell; Joren S Retel; Loren B Andreas; Kristaps Jaudzems; W Trent Franks; Andrew J Nieuwkoop; Matthias Hiller; Victoria Higman; Paul Guerry; Andrea Bertarello; Michael J Knight; Michele Felletti; Tanguy Le Marchand; Svetlana Kotelovica; Inara Akopjana; Kaspars Tars; Monica Stoppini; Vittorio Bellotti; Martino Bolognesi; Stefano Ricagno; James J Chou; Robert G Griffin; Hartmut Oschkinat; Anne Lesage; Lyndon Emsley; Torsten Herrmann; Guido Pintacuda
Journal:  J Am Chem Soc       Date:  2014-08-18       Impact factor: 15.419

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  3 in total

Review 1.  Use of paramagnetic systems to speed-up NMR data acquisition and for structural and dynamic studies.

Authors:  Vojč Kocman; Giacomo M Di Mauro; Gianluigi Veglia; Ayyalusamy Ramamoorthy
Journal:  Solid State Nucl Magn Reson       Date:  2019-07-12       Impact factor: 2.293

Review 2.  Solid-State NMR Investigations of Extracellular Matrixes and Cell Walls of Algae, Bacteria, Fungi, and Plants.

Authors:  Nader Ghassemi; Alexandre Poulhazan; Fabien Deligey; Frederic Mentink-Vigier; Isabelle Marcotte; Tuo Wang
Journal:  Chem Rev       Date:  2021-12-08       Impact factor: 72.087

Review 3.  1H-Detected Biomolecular NMR under Fast Magic-Angle Spinning.

Authors:  Tanguy Le Marchand; Tobias Schubeis; Marta Bonaccorsi; Piotr Paluch; Daniela Lalli; Andrew J Pell; Loren B Andreas; Kristaps Jaudzems; Jan Stanek; Guido Pintacuda
Journal:  Chem Rev       Date:  2022-05-10       Impact factor: 72.087

  3 in total

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