Literature DB >> 29187595

Ubiquitin signaling and autophagy.

Paolo Grumati1, Ivan Dikic2,3.   

Abstract

Ubiquitination is a widespread post-translational modification that controls multiple steps in autophagy, a major lysosome-mediated intracellular degradation pathway. A variety of ubiquitin chains are attached as selective labels on protein aggregates and dysfunctional organelles, thus promoting their autophagy-dependent degradation. Moreover, ubiquitin modification of autophagy regulatory components is essential to positively or negatively regulate autophagy flux in both non-selective and selective pathways. We review the current findings that elucidate the components, timing, and kinetics of the multivalent role of ubiquitin signals in control of amplitude and selectivity of autophagy pathways as well as their impact on the development of human diseases.
© 2018 by The American Society for Biochemistry and Molecular Biology, Inc.

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Year:  2017        PMID: 29187595      PMCID: PMC5900779          DOI: 10.1074/jbc.TM117.000117

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  100 in total

Review 1.  The ubiquitin system.

Authors:  A Hershko; A Ciechanover
Journal:  Annu Rev Biochem       Date:  1998       Impact factor: 23.643

2.  Ubiquitin is phosphorylated by PINK1 to activate parkin.

Authors:  Fumika Koyano; Kei Okatsu; Hidetaka Kosako; Yasushi Tamura; Etsu Go; Mayumi Kimura; Yoko Kimura; Hikaru Tsuchiya; Hidehito Yoshihara; Takatsugu Hirokawa; Toshiya Endo; Edward A Fon; Jean-François Trempe; Yasushi Saeki; Keiji Tanaka; Noriyuki Matsuda
Journal:  Nature       Date:  2014-06-04       Impact factor: 49.962

3.  BAG3 mediates chaperone-based aggresome-targeting and selective autophagy of misfolded proteins.

Authors:  Martin Gamerdinger; A Murat Kaya; Uwe Wolfrum; Albrecht M Clement; Christian Behl
Journal:  EMBO Rep       Date:  2011-01-21       Impact factor: 8.807

Review 4.  Interactions between autophagy receptors and ubiquitin-like proteins form the molecular basis for selective autophagy.

Authors:  Vladimir Rogov; Volker Dötsch; Terje Johansen; Vladimir Kirkin
Journal:  Mol Cell       Date:  2014-01-23       Impact factor: 17.970

5.  DAP-kinase-mediated phosphorylation on the BH3 domain of beclin 1 promotes dissociation of beclin 1 from Bcl-XL and induction of autophagy.

Authors:  Einat Zalckvar; Hanna Berissi; Liat Mizrachy; Yulia Idelchuk; Itay Koren; Miriam Eisenstein; Helena Sabanay; Ronit Pinkas-Kramarski; Adi Kimchi
Journal:  EMBO Rep       Date:  2009-01-30       Impact factor: 8.807

6.  Phosphorylation of OPTN by TBK1 enhances its binding to Ub chains and promotes selective autophagy of damaged mitochondria.

Authors:  Benjamin Richter; Danielle A Sliter; Lina Herhaus; Alexandra Stolz; Chunxin Wang; Petra Beli; Gabriele Zaffagnini; Philipp Wild; Sascha Martens; Sebastian A Wagner; Richard J Youle; Ivan Dikic
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-30       Impact factor: 11.205

7.  HDAC6 controls autophagosome maturation essential for ubiquitin-selective quality-control autophagy.

Authors:  Joo-Yong Lee; Hiroshi Koga; Yoshiharu Kawaguchi; Waixing Tang; Esther Wong; Ya-Sheng Gao; Udai B Pandey; Susmita Kaushik; Emily Tresse; Jianrong Lu; J Paul Taylor; Ana Maria Cuervo; Tso-Pang Yao
Journal:  EMBO J       Date:  2010-01-14       Impact factor: 11.598

8.  Acetylated hsp70 and KAP1-mediated Vps34 SUMOylation is required for autophagosome creation in autophagy.

Authors:  Yonghua Yang; Warren Fiskus; Bao Yong; Peter Atadja; Yoshinori Takahashi; Tej K Pandita; Hong-Gang Wang; Kapil N Bhalla
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-08       Impact factor: 11.205

9.  Global Analysis of Host and Bacterial Ubiquitinome in Response to Salmonella Typhimurium Infection.

Authors:  Evgenij Fiskin; Tihana Bionda; Ivan Dikic; Christian Behrends
Journal:  Mol Cell       Date:  2016-05-19       Impact factor: 17.970

10.  Three-Axis Model for Atg Recruitment in Autophagy against Salmonella.

Authors:  Takeshi Noda; Shun Kageyama; Naonobu Fujita; Tamotsu Yoshimori
Journal:  Int J Cell Biol       Date:  2012-02-28
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  101 in total

1.  CYLD exaggerates pressure overload-induced cardiomyopathy via suppressing autolysosome efflux in cardiomyocytes.

Authors:  Lei Qi; Huimei Zang; Weiwei Wu; Prakash Nagarkatti; Mitzi Nagarkatti; Qinghang Liu; Jeffrey Robbins; Xuejun Wang; Taixing Cui
Journal:  J Mol Cell Cardiol       Date:  2020-06-14       Impact factor: 5.000

Review 2.  Lysosome biology in autophagy.

Authors:  Willa Wen-You Yim; Noboru Mizushima
Journal:  Cell Discov       Date:  2020-02-11       Impact factor: 10.849

Review 3.  Biological Functions of Autophagy Genes: A Disease Perspective.

Authors:  Beth Levine; Guido Kroemer
Journal:  Cell       Date:  2019-01-10       Impact factor: 41.582

Review 4.  N-degron and C-degron pathways of protein degradation.

Authors:  Alexander Varshavsky
Journal:  Proc Natl Acad Sci U S A       Date:  2019-01-08       Impact factor: 11.205

Review 5.  On the edge of degradation: Autophagy regulation by RNA decay.

Authors:  Elizabeth Delorme-Axford; Daniel J Klionsky
Journal:  Wiley Interdiscip Rev RNA       Date:  2018-12-17       Impact factor: 9.957

Review 6.  Introduction to the Thematic Minireview Series: Autophagy.

Authors:  George N DeMartino
Journal:  J Biol Chem       Date:  2018-02-21       Impact factor: 5.157

Review 7.  Ribosome Abundance Control Via the Ubiquitin-Proteasome System and Autophagy.

Authors:  Heeseon An; J Wade Harper
Journal:  J Mol Biol       Date:  2019-06-11       Impact factor: 5.469

Review 8.  TRIM proteins in autophagy: selective sensors in cell damage and innate immune responses.

Authors:  Martina Di Rienzo; Alessandra Romagnoli; Manuela Antonioli; Mauro Piacentini; Gian Maria Fimia
Journal:  Cell Death Differ       Date:  2020-01-22       Impact factor: 15.828

Review 9.  Structure, dynamics and functions of UBQLNs: at the crossroads of protein quality control machinery.

Authors:  Tongyin Zheng; Yiran Yang; Carlos A Castañeda
Journal:  Biochem J       Date:  2020-09-30       Impact factor: 3.857

Review 10.  TGF-β signaling pathway mediated by deubiquitinating enzymes.

Authors:  Soo-Yeon Kim; Kwang-Hyun Baek
Journal:  Cell Mol Life Sci       Date:  2018-10-22       Impact factor: 9.261

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