Literature DB >> 29161012

Top-Down Proteomics: Ready for Prime Time?

Bifan Chen1, Kyle A Brown1, Ziqing Lin2,3, Ying Ge1,2,3.   

Abstract

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Year:  2017        PMID： 29161012      PMCID： PMC6138622          DOI： 10.1021/acs.analchem.7b04747

Source DB:  PubMed          Journal:  Anal Chem        ISSN： 0003-2700            Impact factor:   6.986


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  186 in total

1.  Activated ion electron capture dissociation for mass spectral sequencing of larger (42 kDa) proteins.

Authors:  D M Horn; Y Ge; F W McLafferty
Journal:  Anal Chem       Date:  2000-10-15       Impact factor: 6.986

2.  Label-Free Relative Quantitation of Isobaric and Isomeric Human Histone H2A and H2B Variants by Fourier Transform Ion Cyclotron Resonance Top-Down MS/MS.

Authors:  Xibei Dang; Amar Singh; Brian D Spetman; Krystal D Nolan; Jennifer S Isaacs; Jonathan H Dennis; Stephen Dalton; Alan G Marshall; Nicolas L Young
Journal:  J Proteome Res       Date:  2016-08-03       Impact factor: 4.466

3.  Protein labeling by iTRAQ: a new tool for quantitative mass spectrometry in proteome research.

Authors:  Sebastian Wiese; Kai A Reidegeld; Helmut E Meyer; Bettina Warscheid
Journal:  Proteomics       Date:  2007-02       Impact factor: 3.984

4.  Top-Down Proteomics of Large Proteins up to 223 kDa Enabled by Serial Size Exclusion Chromatography Strategy.

Authors:  Wenxuan Cai; Trisha Tucholski; Bifan Chen; Andrew J Alpert; Sean McIlwain; Takushi Kohmoto; Song Jin; Ying Ge
Journal:  Anal Chem       Date:  2017-05-02       Impact factor: 6.986

5.  Improving Performance Metrics of Ultraviolet Photodissociation Mass Spectrometry by Selective Precursor Ejection.

Authors:  Dustin D Holden; Jennifer S Brodbelt
Journal:  Anal Chem       Date:  2016-12-20       Impact factor: 6.986

6.  Interpreting raw biological mass spectra using isotopic mass-to-charge ratio and envelope fingerprinting.

Authors:  Li Li; Zhixin Tian
Journal:  Rapid Commun Mass Spectrom       Date:  2013-06-15       Impact factor: 2.419

Review 7.  Top-down proteomics in health and disease: challenges and opportunities.

Authors:  Zachery R Gregorich; Ying Ge
Journal:  Proteomics       Date:  2014-05       Impact factor: 3.984

8.  A fast semi-quantitative LC-MS method for measurement of intact apolipoprotein A-I reveals novel proteoforms in serum.

Authors:  M Gåfvels; P Bengtson
Journal:  Clin Chim Acta       Date:  2015-01-17       Impact factor: 3.786

9.  Enhanced Dissociation of Intact Proteins with High Capacity Electron Transfer Dissociation.

Authors:  Nicholas M Riley; Christopher Mullen; Chad R Weisbrod; Seema Sharma; Michael W Senko; Vlad Zabrouskov; Michael S Westphall; John E P Syka; Joshua J Coon
Journal:  J Am Soc Mass Spectrom       Date:  2015-11-20       Impact factor: 3.109

10.  Effective protein separation by coupling hydrophobic interaction and reverse phase chromatography for top-down proteomics.

Authors:  Lichen Xiu; Santosh G Valeja; Andrew J Alpert; Song Jin; Ying Ge
Journal:  Anal Chem       Date:  2014-07-09       Impact factor: 6.986
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  61 in total

Review 1.  Fast photochemical oxidation of proteins (FPOP): A powerful mass spectrometry-based structural proteomics tool.

Authors:  Danté T Johnson; Luciano H Di Stefano; Lisa M Jones
Journal:  J Biol Chem       Date:  2019-07-01       Impact factor: 5.157

2.  Quantitative Mass Spectrometry-Based Proteomics: An Overview.

Authors:  Svitlana Rozanova; Katalin Barkovits; Miroslav Nikolov; Carla Schmidt; Henning Urlaub; Katrin Marcus
Journal:  Methods Mol Biol       Date:  2021

3.  The Value of Activated Ion Electron Transfer Dissociation for High-Throughput Top-Down Characterization of Intact Proteins.

Authors:  Nicholas M Riley; Jacek W Sikora; Henrique S Seckler; Joseph B Greer; Ryan T Fellers; Richard D LeDuc; Michael S Westphall; Paul M Thomas; Neil L Kelleher; Joshua J Coon
Journal:  Anal Chem       Date:  2018-07-05       Impact factor: 6.986

4.  Online Hydrophobic Interaction Chromatography-Mass Spectrometry for the Analysis of Intact Monoclonal Antibodies.

Authors:  Bifan Chen; Ziqing Lin; Andrew J Alpert; Cexiong Fu; Qunying Zhang; Wayne A Pritts; Ying Ge
Journal:  Anal Chem       Date:  2018-06-04       Impact factor: 6.986

5.  Quantitation of Intact Proteins in Human Plasma Using Top-Down Parallel Reaction Monitoring-MS.

Authors:  Yuchao Chen; Pan Mao; Daojing Wang
Journal:  Anal Chem       Date:  2018-09-07       Impact factor: 6.986

6.  Middle-Down Multi-Attribute Analysis of Antibody-Drug Conjugates with Electron Transfer Dissociation.

Authors:  Bifan Chen; Ziqing Lin; Yanlong Zhu; Yutong Jin; Eli Larson; Qingge Xu; Cexiong Fu; Zhaorui Zhang; Qunying Zhang; Wayne A Pritts; Ying Ge
Journal:  Anal Chem       Date:  2019-09-06       Impact factor: 6.986

7.  Suspect and non-target screening of acutely toxic Prymnesium parvum.

Authors:  Raegyn B Taylor; Bridgett N Hill; Jonathan M Bobbitt; Amanda S Hering; Bryan W Brooks; C Kevin Chambliss
Journal:  Sci Total Environ       Date:  2020-01-21       Impact factor: 7.963

Review 8.  Identification and Quantification of Proteoforms by Mass Spectrometry.

Authors:  Leah V Schaffer; Robert J Millikin; Rachel M Miller; Lissa C Anderson; Ryan T Fellers; Ying Ge; Neil L Kelleher; Richard D LeDuc; Xiaowen Liu; Samuel H Payne; Liangliang Sun; Paul M Thomas; Trisha Tucholski; Zhe Wang; Si Wu; Zhijie Wu; Dahang Yu; Michael R Shortreed; Lloyd M Smith
Journal:  Proteomics       Date:  2019-05       Impact factor: 3.984

Review 9.  Evolution of Structural Biology through the Lens of Mass Spectrometry.

Authors:  Upneet Kaur; Danté T Johnson; Emily E Chea; Daniel J Deredge; Jessica A Espino; Lisa M Jones
Journal:  Anal Chem       Date:  2018-12-06       Impact factor: 6.986

10.  High-Throughput Proteomics Enabled by a Photocleavable Surfactant.

Authors:  Kyle A Brown; Trisha Tucholski; Christian Eken; Samantha Knott; Yanlong Zhu; Song Jin; Ying Ge
Journal:  Angew Chem Int Ed Engl       Date:  2020-03-24       Impact factor: 15.336
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