Literature DB >> 29159811

A deep learning method for classifying mammographic breast density categories.

Aly A Mohamed1, Wendie A Berg1,2, Hong Peng3, Yahong Luo4, Rachel C Jankowitz2,5, Shandong Wu6.   

Abstract

PURPOSE: Mammographic breast density is an established risk marker for breast cancer and is visually assessed by radiologists in routine mammogram image reading, using four qualitative Breast Imaging and Reporting Data System (BI-RADS) breast density categories. It is particularly difficult for radiologists to consistently distinguish the two most common and most variably assigned BI-RADS categories, i.e., "scattered density" and "heterogeneously dense". The aim of this work was to investigate a deep learning-based breast density classifier to consistently distinguish these two categories, aiming at providing a potential computerized tool to assist radiologists in assigning a BI-RADS category in current clinical workflow.
METHODS: In this study, we constructed a convolutional neural network (CNN)-based model coupled with a large (i.e., 22,000 images) digital mammogram imaging dataset to evaluate the classification performance between the two aforementioned breast density categories. All images were collected from a cohort of 1,427 women who underwent standard digital mammography screening from 2005 to 2016 at our institution. The truths of the density categories were based on standard clinical assessment made by board-certified breast imaging radiologists. Effects of direct training from scratch solely using digital mammogram images and transfer learning of a pretrained model on a large nonmedical imaging dataset were evaluated for the specific task of breast density classification. In order to measure the classification performance, the CNN classifier was also tested on a refined version of the mammogram image dataset by removing some potentially inaccurately labeled images. Receiver operating characteristic (ROC) curves and the area under the curve (AUC) were used to measure the accuracy of the classifier.
RESULTS: The AUC was 0.9421 when the CNN-model was trained from scratch on our own mammogram images, and the accuracy increased gradually along with an increased size of training samples. Using the pretrained model followed by a fine-tuning process with as few as 500 mammogram images led to an AUC of 0.9265. After removing the potentially inaccurately labeled images, AUC was increased to 0.9882 and 0.9857 for without and with the pretrained model, respectively, both significantly higher (P < 0.001) than when using the full imaging dataset.
CONCLUSIONS: Our study demonstrated high classification accuracies between two difficult to distinguish breast density categories that are routinely assessed by radiologists. We anticipate that our approach will help enhance current clinical assessment of breast density and better support consistent density notification to patients in breast cancer screening.
© 2017 American Association of Physicists in Medicine.

Entities:  

Keywords:  BI-RADS; breast density; convolutional neural network (CNN); deep learning; digital mammography; transfer learning

Mesh:

Year:  2017        PMID: 29159811      PMCID: PMC5774233          DOI: 10.1002/mp.12683

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


  21 in total

1.  Breast Imaging Reporting and Data System: inter- and intraobserver variability in feature analysis and final assessment.

Authors:  W A Berg; C Campassi; P Langenberg; M J Sexton
Journal:  AJR Am J Roentgenol       Date:  2000-06       Impact factor: 3.959

2.  The heritability of mammographically dense and nondense breast tissue.

Authors:  Jennifer Stone; Gillian S Dite; Anoma Gunasekara; Dallas R English; Margaret R E McCredie; Graham G Giles; Jennifer N Cawson; Robert A Hegele; Anna M Chiarelli; Martin J Yaffe; Norman F Boyd; John L Hopper
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2006-04       Impact factor: 4.254

3.  A longitudinal investigation of mammographic density: the multiethnic cohort.

Authors:  Gertraud Maskarinec; Ian Pagano; Galina Lurie; Laurence N Kolonel
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2006-04       Impact factor: 4.254

4.  Learning hierarchical features for scene labeling.

Authors:  Clément Farabet; Camille Couprie; Laurent Najman; Yann Lecun
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2013-08       Impact factor: 6.226

5.  Unsupervised Deep Learning Applied to Breast Density Segmentation and Mammographic Risk Scoring.

Authors:  Michiel Kallenberg; Kersten Petersen; Mads Nielsen; Andrew Y Ng; Christian Igel; Celine M Vachon; Katharina Holland; Rikke Rass Winkel; Nico Karssemeijer; Martin Lillholm
Journal:  IEEE Trans Med Imaging       Date:  2016-02-18       Impact factor: 10.048

6.  Breast patterns as an index of risk for developing breast cancer.

Authors:  J N Wolfe
Journal:  AJR Am J Roentgenol       Date:  1976-06       Impact factor: 3.959

7.  The Tabár classification of mammographic parenchymal patterns.

Authors:  I T Gram; E Funkhouser; L Tabár
Journal:  Eur J Radiol       Date:  1997-02       Impact factor: 3.528

8.  Deep Convolutional Neural Networks for Computer-Aided Detection: CNN Architectures, Dataset Characteristics and Transfer Learning.

Authors:  Hoo-Chang Shin; Holger R Roth; Mingchen Gao; Le Lu; Ziyue Xu; Isabella Nogues; Jianhua Yao; Daniel Mollura; Ronald M Summers
Journal:  IEEE Trans Med Imaging       Date:  2016-02-11       Impact factor: 10.048

9.  Computer-Aided Diagnosis with Deep Learning Architecture: Applications to Breast Lesions in US Images and Pulmonary Nodules in CT Scans.

Authors:  Jie-Zhi Cheng; Dong Ni; Yi-Hong Chou; Jing Qin; Chui-Mei Tiu; Yeun-Chung Chang; Chiun-Sheng Huang; Dinggang Shen; Chung-Ming Chen
Journal:  Sci Rep       Date:  2016-04-15       Impact factor: 4.379

10.  Deep learning for digital pathology image analysis: A comprehensive tutorial with selected use cases.

Authors:  Andrew Janowczyk; Anant Madabhushi
Journal:  J Pathol Inform       Date:  2016-07-26
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  40 in total

1.  Evaluation of data augmentation via synthetic images for improved breast mass detection on mammograms using deep learning.

Authors:  Kenny H Cha; Nicholas Petrick; Aria Pezeshk; Christian G Graff; Diksha Sharma; Andreu Badal; Berkman Sahiner
Journal:  J Med Imaging (Bellingham)       Date:  2019-11-22

2.  Prediction of reader estimates of mammographic density using convolutional neural networks.

Authors:  Georgia V Ionescu; Martin Fergie; Michael Berks; Elaine F Harkness; Johan Hulleman; Adam R Brentnall; Jack Cuzick; D Gareth Evans; Susan M Astley
Journal:  J Med Imaging (Bellingham)       Date:  2019-01-31

3.  Inaccurate Labels in Weakly-Supervised Deep Learning: Automatic Identification and Correction and Their Impact on Classification Performance.

Authors:  Degan Hao; Lei Zhang; Jules Sumkin; Aly Mohamed; Shandong Wu
Journal:  IEEE J Biomed Health Inform       Date:  2020-02-17       Impact factor: 5.772

Review 4.  Digital Breast Tomosynthesis: Concepts and Clinical Practice.

Authors:  Alice Chong; Susan P Weinstein; Elizabeth S McDonald; Emily F Conant
Journal:  Radiology       Date:  2019-05-14       Impact factor: 11.105

5.  Deep Learning Pre-training Strategy for Mammogram Image Classification: an Evaluation Study.

Authors:  Kadie Clancy; Sarah Aboutalib; Aly Mohamed; Jules Sumkin; Shandong Wu
Journal:  J Digit Imaging       Date:  2020-10       Impact factor: 4.056

Review 6.  Designing deep learning studies in cancer diagnostics.

Authors:  Andreas Kleppe; Ole-Johan Skrede; Sepp De Raedt; Knut Liestøl; David J Kerr; Håvard E Danielsen
Journal:  Nat Rev Cancer       Date:  2021-01-29       Impact factor: 60.716

7.  Deep Learning Approach for Evaluating Knee MR Images: Achieving High Diagnostic Performance for Cartilage Lesion Detection.

Authors:  Fang Liu; Zhaoye Zhou; Alexey Samsonov; Donna Blankenbaker; Will Larison; Andrew Kanarek; Kevin Lian; Shivkumar Kambhampati; Richard Kijowski
Journal:  Radiology       Date:  2018-07-31       Impact factor: 11.105

Review 8.  Deep learning with convolutional neural network in radiology.

Authors:  Koichiro Yasaka; Hiroyuki Akai; Akira Kunimatsu; Shigeru Kiryu; Osamu Abe
Journal:  Jpn J Radiol       Date:  2018-03-01       Impact factor: 2.374

Review 9.  CAD and AI for breast cancer-recent development and challenges.

Authors:  Heang-Ping Chan; Ravi K Samala; Lubomir M Hadjiiski
Journal:  Br J Radiol       Date:  2019-12-16       Impact factor: 3.039

Review 10.  Artificial Intelligence for Mammography and Digital Breast Tomosynthesis: Current Concepts and Future Perspectives.

Authors:  Krzysztof J Geras; Ritse M Mann; Linda Moy
Journal:  Radiology       Date:  2019-09-24       Impact factor: 11.105

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