Literature DB >> 29133446

Bulk measurements of messy chemistries are needed for a theory of the origins of life.

Nicholas Guttenberg1,2, Nathaniel Virgo1, Kuhan Chandru1, Caleb Scharf3, Irena Mamajanov4.   

Abstract

A feature of many of the chemical systems plausibly involved in the origins of terrestrial life is that they are complex and messy-producing a wide range of compounds via a wide range of mechanisms. However, the fundamental behaviour of such systems is currently not well understood; we do not have the tools to make statistical predictions about such complex chemical networks. This is, in part, due to a lack of quantitative data from which such a theory could be built; specifically, functional measurements of messy chemical systems. Here, we propose that the pantheon of experimental approaches to the origins of life should be expanded to include the study of 'functional measurements'-the direct study of bulk properties of chemical systems and their interactions with other compounds, the formation of structures and other behaviours, even in cases where the precise composition and mechanisms are unknown.This article is part of the themed issue 'Reconceptualizing the origins of life'.
© 2017 The Author(s).

Keywords:  bulk measurements; messy chemistry; prebiotic chemistry; synthetic chemistry

Mesh:

Year:  2017        PMID: 29133446      PMCID: PMC5686404          DOI: 10.1098/rsta.2016.0347

Source DB:  PubMed          Journal:  Philos Trans A Math Phys Eng Sci        ISSN: 1364-503X            Impact factor:   4.226


  17 in total

1.  Origin of life. Life as we don't know it.

Authors:  G Wächtershäuser
Journal:  Science       Date:  2000-08-25       Impact factor: 47.728

2.  Lipid synthesis under hydrothermal conditions by Fischer-Tropsch-type reactions.

Authors:  T M McCollom; G Ritter; B R Simoneit
Journal:  Orig Life Evol Biosph       Date:  1999-03       Impact factor: 1.950

Review 3.  Organic-inorganic interactions in petroleum-producing sedimentary basins.

Authors:  Jeffrey S Seewald
Journal:  Nature       Date:  2003-11-20       Impact factor: 49.962

4.  Selection and amplification of hosts from dynamic combinatorial libraries of macrocyclic disulfides.

Authors:  Sijbren Otto; Ricardo L E Furlan; Jeremy K M Sanders
Journal:  Science       Date:  2002-07-26       Impact factor: 47.728

Review 5.  Out of fuzzy chemistry: from prebiotic chemistry to metabolic networks.

Authors:  Juli Peretó
Journal:  Chem Soc Rev       Date:  2012-04-16       Impact factor: 54.564

6.  HCN polymers characterized by solid state NMR: chains and sheets formed in the neat liquid.

Authors:  Irena Mamajanov; Judith Herzfeld
Journal:  J Chem Phys       Date:  2009-04-07       Impact factor: 3.488

7.  Polyoxometalate clusters, nanostructures and materials: from self assembly to designer materials and devices.

Authors:  De-Liang Long; Eric Burkholder; Leroy Cronin
Journal:  Chem Soc Rev       Date:  2006-10-30       Impact factor: 54.564

8.  Paradoxes in the origin of life.

Authors:  Steven A Benner
Journal:  Orig Life Evol Biosph       Date:  2015-01-22       Impact factor: 1.950

9.  Autocatalytic sets of proteins.

Authors:  S A Kauffman
Journal:  J Theor Biol       Date:  1986-03-07       Impact factor: 2.691

10.  Asphalt, water, and the prebiotic synthesis of ribose, ribonucleosides, and RNA.

Authors:  Steven A Benner; Hyo-Joong Kim; Matthew A Carrigan
Journal:  Acc Chem Res       Date:  2012-03-28       Impact factor: 22.384

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  15 in total

Review 1.  Hidden Concepts in the History and Philosophy of Origins-of-Life Studies: a Workshop Report.

Authors:  Carlos Mariscal; Ana Barahona; Nathanael Aubert-Kato; Arsev Umur Aydinoglu; Stuart Bartlett; María Luz Cárdenas; Kuhan Chandru; Carol Cleland; Benjamin T Cocanougher; Nathaniel Comfort; Athel Cornish-Bowden; Terrence Deacon; Tom Froese; Donato Giovannelli; John Hernlund; Piet Hut; Jun Kimura; Marie-Christine Maurel; Nancy Merino; Alvaro Moreno; Mayuko Nakagawa; Juli Peretó; Nathaniel Virgo; Olaf Witkowski; H James Cleaves
Journal:  Orig Life Evol Biosph       Date:  2019-08-09       Impact factor: 1.950

Review 2.  Exoplanet Biosignatures: Future Directions.

Authors:  Sara I Walker; William Bains; Leroy Cronin; Shiladitya DasSarma; Sebastian Danielache; Shawn Domagal-Goldman; Betul Kacar; Nancy Y Kiang; Adrian Lenardic; Christopher T Reinhard; William Moore; Edward W Schwieterman; Evgenya L Shkolnik; Harrison B Smith
Journal:  Astrobiology       Date:  2018-06       Impact factor: 4.335

3.  Probing complexity: thermodynamics and computational mechanics approaches to origins studies.

Authors:  Stuart J Bartlett; Patrick Beckett
Journal:  Interface Focus       Date:  2019-10-18       Impact factor: 3.906

4.  Membraneless polyester microdroplets as primordial compartments at the origins of life.

Authors:  Tony Z Jia; Kuhan Chandru; Yayoi Hongo; Rehana Afrin; Tomohiro Usui; Kunihiro Myojo; H James Cleaves
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-22       Impact factor: 11.205

5.  Formation of Abasic Oligomers in Nonenzymatic Polymerization of Canonical Nucleotides.

Authors:  Chaitanya V Mungi; Niraja V Bapat; Yayoi Hongo; Sudha Rajamani
Journal:  Life (Basel)       Date:  2019-07-04

6.  Wet-Dry Cycling Delays the Gelation of Hyperbranched Polyesters: Implications to the Origin of Life.

Authors:  Irena Mamajanov
Journal:  Life (Basel)       Date:  2019-07-01

Review 7.  The "Water Problem"(sic), the Illusory Pond and Life's Submarine Emergence-A Review.

Authors:  Michael J Russell
Journal:  Life (Basel)       Date:  2021-05-10

8.  A robotic prebiotic chemist probes long term reactions of complexifying mixtures.

Authors:  Silke Asche; Geoffrey J T Cooper; Graham Keenan; Cole Mathis; Leroy Cronin
Journal:  Nat Commun       Date:  2021-06-10       Impact factor: 14.919

9.  Polyesters as a Model System for Building Primitive Biologies from Non-Biological Prebiotic Chemistry.

Authors:  Kuhan Chandru; Irena Mamajanov; H James Cleaves; Tony Z Jia
Journal:  Life (Basel)       Date:  2020-01-19

Review 10.  Connecting primitive phase separation to biotechnology, synthetic biology, and engineering.

Authors:  Tony Z Jia; Po-Hsiang Wang; Tatsuya Niwa; Irena Mamajanov
Journal:  J Biosci       Date:  2021       Impact factor: 1.826

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